Protein

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Genbank accession
YP_009274254.1 [GenBank]
Protein name
minor tail protein
RBP type
TSP
Evidence DepoScope
Probability 0,98
TSP
Evidence RBPdetect
Probability 0,90
Protein sequence
MSLDFADPEFAAQLDSIIRKTVRAEIDKNRPAPRYAVVNSINLAQKYCMVTYTGETDSVRVPFNTVIPNEVGQEVRIEGTPGDRYITAIRGTSKLEQDTDNATGAAQTAQEQAQSASEAAEAASNQANNVEAQLFTRTTRPLYRGLNPTGESSFDYQLLSEPGLHNHSAGFTMESAGSHSGHDGTLGTKGSHTHEMIITVGAGGTSEIAVTASLLHMPFIKCEMASRKDVLYFKARRTNDLTTCYADIYIMEDDGSWTWKATTANLALDITTSKGWIVVNTDAYVSSPKDIIGVQFRPVGAGTLYLDGRRFPIENYPNTVRPLNVSMARTTNSAPASIAASEADSRYSYLLAYVEYGQLSIPAPAPRDFFENFNSVPIGTSFPYAAKDQGEHLSISNGELVNPSNQLLTQRAMRFYKSPVNTDVFEVEWTVRAIDGDSIAAGIVLFGSSTMQRFATVQINKNEVEITTAGSGIGNSQTQRAITSTTGNNGRWRATFDINDNRTLKIYKPGSPTVPIVQWSDTGNYLFMGKGNRLAGCYIEHGSFKSAGILEDFAYRDWIQS
Physico‐chemical
properties
protein length:561 AA
molecular weight: 61301,55460 Da
isoelectric point:5,43411
aromaticity:0,09091
hydropathy:-0,35383

Domains

Domains [InterPro]
DC_0513
STR
53–561
DC_0513
Coil
Unmapped
106–133
Coil
YP_009274254.1
1 561
Architecture
STR
STR 53-561
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009274254.1
1 561
Domain Start End Length (AA) Confidence
N-terminal 1 210 210 0,8116
Central domain 211 409 200 0,0486
C-terminal 410 561 151 0,9844
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-210
Central
211-409
C-terminal
410-561

Taxonomy

  Name Taxonomy ID Lineage
Phage Gordonia phage Orchid
[NCBI] 		1838075 Uroviricota > Caudoviricetes > Orchidvirus >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009274254.1 [NCBI]
Genbank nucleotide accession
NC_030915 [NCBI]
CDS location
range 31352 -> 33037
strand +
CDS
ATGAGTCTGGATTTTGCTGATCCCGAATTTGCCGCACAGCTTGACAGTATTATACGAAAGACTGTGCGTGCTGAGATTGACAAGAATCGTCCCGCGCCGCGATACGCCGTGGTCAATTCTATCAATCTTGCGCAGAAGTATTGCATGGTTACCTATACGGGTGAAACCGATTCCGTGCGTGTACCCTTCAATACGGTAATCCCGAATGAGGTTGGGCAAGAGGTACGTATTGAGGGGACGCCAGGAGACCGTTATATCACGGCCATTCGAGGTACCTCAAAGCTAGAGCAGGACACTGACAACGCCACAGGGGCCGCGCAGACGGCACAGGAGCAGGCTCAGTCAGCCAGCGAGGCAGCAGAAGCCGCGTCGAATCAGGCTAATAACGTTGAAGCGCAGCTTTTTACGCGCACAACTCGACCTTTGTATCGTGGCCTAAACCCCACCGGTGAATCATCTTTTGATTACCAGCTTCTTAGTGAGCCTGGATTACATAATCATTCCGCTGGTTTTACTATGGAATCCGCTGGCTCTCATTCAGGTCATGATGGAACCCTTGGCACTAAGGGTTCCCATACCCATGAGATGATTATCACCGTTGGTGCTGGTGGTACGTCTGAAATTGCGGTAACGGCATCACTGTTGCACATGCCATTTATTAAGTGCGAGATGGCGTCTAGAAAAGATGTGCTGTACTTTAAGGCACGTCGAACCAATGATCTCACTACGTGTTATGCAGATATTTACATCATGGAAGACGATGGATCGTGGACGTGGAAAGCCACTACCGCCAACCTTGCTCTTGATATAACGACCAGCAAGGGCTGGATAGTTGTCAACACCGATGCGTATGTTTCTAGTCCCAAGGATATCATAGGCGTTCAATTTAGGCCGGTTGGTGCCGGAACACTCTATCTAGACGGTAGACGTTTTCCAATTGAAAACTATCCTAATACCGTTCGACCGCTGAACGTTTCAATGGCGCGAACTACAAATTCTGCACCGGCATCCATTGCTGCAAGCGAAGCTGATTCCAGGTATTCTTACCTGCTGGCATACGTGGAATATGGACAGTTAAGTATTCCTGCACCTGCACCCAGAGACTTCTTTGAGAACTTTAATAGCGTGCCAATTGGTACATCGTTTCCGTATGCGGCTAAAGATCAGGGTGAGCATCTTTCTATTTCTAATGGAGAGCTTGTTAATCCAAGCAATCAGCTTCTTACCCAGCGAGCTATGAGGTTCTATAAGAGTCCGGTCAATACAGATGTCTTCGAGGTTGAATGGACAGTCCGAGCTATTGATGGTGATAGCATTGCAGCCGGTATAGTGCTGTTTGGTTCATCTACCATGCAGAGATTTGCTACCGTACAAATCAACAAGAATGAAGTTGAGATTACTACCGCCGGATCGGGAATTGGCAACAGTCAAACTCAGCGAGCTATCACTTCAACAACCGGAAACAATGGTCGATGGCGAGCCACATTCGATATCAATGACAATCGTACTCTGAAAATCTACAAGCCAGGATCACCAACTGTTCCCATTGTGCAGTGGTCCGATACAGGCAATTACCTGTTCATGGGTAAAGGTAACCGTCTGGCCGGATGCTACATTGAGCACGGTAGCTTTAAGAGTGCGGGTATTCTTGAAGACTTCGCCTACAGAGATTGGATTCAGTCATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
11325e292a7ee2ef63cc888b6630084e071fc935f72dead056e216dbeb371cd3
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7374
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50