Protein

View in Explore
Genbank accession
ABI94984.1 [GenBank]
Protein name
fibritin neck whiskers
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
Protein sequence
MIELKDLPFVDSVPGEGQERISWIKNGEEILGASTKYGNDGSMNRPTVSVFKNVEVLDENVGILKTAIETSQKDIKTIQGVLDVSGDIEALSQISVNKNDISNLKTLTNEHTDILTGTNNTVDKIIADIGPFNDEENSVYRTIRNDLLWIKQELGQYSGQDINGLPVVGNASTGMKHRIITNSTLLSSQGIRLSELENKFTESDVGSLTVEVGKLRDELGNKPVDFGPNIYNRLNTIDDKQTLINSDIAEIKSSIGYPENVSIITEINNNKSSIESINNELNQSEGVKQRLTAIETSIGSDDIPSSIKGKIKNHTTSIESLNGIVGENTSSGLRANVSWLNQIVGTDSSGGQPSPSGSLLNKVSVLEGEVSVLNNNVQNIQVEIGNNRTGIKGQVIELTSLINGNNPDGSTVEERGLTNSVKTNETNIAAVTHEVNTAKDNISSLQSSVQALQEAGYIPEAPKDGQAYVRKDGEWVLLSTFLSPA
Physico‐chemical
properties
protein length:485 AA
molecular weight: 52313,40050 Da
isoelectric point:4,65036
aromaticity:0,03505
hydropathy:-0,40804

Domains

Domains [InterPro]
G3DSA:1.20.5.320
STR
1–90
G3DSA:1.20.5.320 DC_0379 IPR012473
SSF58046
ATT
2–106
SSF58046 Coil IPR012473 IPR012473 IPR012473
IPR012473
RBD
370–396
IPR012473 Coil
G3DSA:1.20.5.320
STR
370–482
G3DSA:1.20.5.320
SSF58046
ATT
371–482
SSF58046
IPR012473
RBD
371–480
IPR012473
ABI94984.1
1 485
Architecture
ATT
STR
ATT
ATT 1-106 | STR 107-370 | ATT 371-482 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage RB32
[NCBI] 		2681602 Uroviricota > Caudoviricetes > Pantevenvirales > Tevenvirinae > Tequatrovirus
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ABI94984.1 [NCBI]
Genbank nucleotide accession
DQ904452.1 [NCBI]
CDS location
range 89673 -> 91130
strand +
CDS
ATGATTGAATTAAAAGATTTACCTTTTGTTGATAGCGTTCCTGGCGAAGGTCAGGAACGTATTTCATGGATTAAAAATGGTGAAGAAATACTAGGAGCTAGTACTAAGTATGGAAACGATGGATCAATGAATAGACCAACTGTTTCTGTGTTTAAAAACGTCGAGGTTCTTGATGAAAATGTGGGAATTCTTAAAACTGCCATTGAAACATCACAGAAAGATATTAAAACAATTCAAGGAGTTTTAGATGTATCAGGAGATATAGAAGCACTATCGCAGATCAGTGTTAATAAAAATGACATATCAAATTTAAAGACACTTACTAATGAACACACTGATATATTAACTGGAACTAATAATACAGTTGACAAAATTATTGCTGATATAGGTCCATTTAATGATGAAGAAAATTCTGTTTATAGAACAATTAGAAATGATTTATTGTGGATTAAACAGGAATTAGGACAATATTCTGGCCAAGATATTAACGGTCTTCCTGTTGTTGGTAATGCTAGCACAGGAATGAAACACAGAATAATAACAAATAGTACATTATTATCTTCACAAGGCATTCGTTTAAGCGAATTAGAAAATAAATTTACTGAATCTGACGTAGGATCATTAACTGTTGAAGTTGGTAAATTACGTGATGAACTTGGTAATAAACCGGTAGATTTTGGACCAAATATTTATAATAGATTAAACACTATAGATGATAAACAAACTTTAATAAATTCTGATATAGCAGAAATTAAATCTTCTATTGGATACCCAGAAAATGTTTCTATAATAACAGAAATTAATAATAACAAAAGTAGCATTGAATCTATTAATAATGAATTAAATCAGAGTGAAGGTGTTAAACAGCGCTTAACGGCTATTGAAACTTCTATAGGTTCAGATGATATTCCTTCTAGTATTAAAGGAAAAATTAAAAATCACACAACTTCTATTGAGTCTTTAAACGGAATTGTTGGTGAAAACACTTCGTCTGGTTTAAGAGCGAATGTTTCGTGGTTAAATCAAATTGTTGGAACTGACTCCAGCGGAGGACAACCGTCTCCTTCTGGATCTCTATTAAATAAAGTTTCAGTGCTTGAAGGAGAAGTTTCAGTTTTAAACAATAATGTTCAAAATATACAAGTTGAAATAGGAAATAATAGAACAGGAATTAAAGGTCAAGTTATTGAACTTACTTCACTTATAAATGGAAATAATCCTGACGGATCAACTGTTGAAGAACGAGGATTAACTAATTCTGTAAAAACGAATGAAACCAACATTGCGGCAGTCACACATGAAGTAAATACAGCTAAAGACAATATATCCTCTTTACAGAGCAGCGTTCAAGCTCTACAAGAAGCAGGTTATATTCCTGAAGCTCCAAAAGATGGCCAAGCTTACGTTCGTAAAGACGGCGAATGGGTACTACTTTCTACCTTTTTATCACCAGCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
d5a50a34c754a5f154e10db353f4b0b249dae38e28c6d76c5fd691826405603f
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7127
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Comparative analysis of close relatives of Bacteriophage T4 Nolan,J.M., Rowe,R.D., Timpte,C.S. and Schluchter,W.M. 2009-07 — GenBank