Protein

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Genbank accession
WAB24333.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,87
Protein sequence
MPSTGKTPTLGLNKWELTDKPKMKDFNKDNENIENFAAEHKQKMTEVEKKSKSNEDRLDALRVGTINRLEWYNSESYTGPGNITSITDAPTKRRGFKWSGMSTGPQTLEIKTLPIEPNSDYVLAFLEDIEGSFTSYEIKLAYTSGGQQYKSIVKQGSTPQSNGYKLKTHKFSIPSGATDTKIQFVVQGATSSTSLKVLNLLLARGNVVPDYNLAPEDVLKRLDLLFEKDTSLQNQVNQKAAKVDVIQKVDVPVDRDCNSFKAGNSFCSFDTGNGDFKNTPEGTLAQGSARVFILRNTGLGDGKNRFQQEFINLYPSDTITRYIRNYVYESNTWGKWHKAYDSANKPTPEEIGAYSAYLDMNDTDLNNIKIPGIYSGYKNMANAPSQGISIMEVIRYSPDWVVQRFKTIPPNGKGITYTRGFYNGNTWSDWVKVYDENNRPTPADIGAWDKTAKRLEGVDLNTITEGGIYSTVRNSVDRNAPISADGRLIVLSWNTGHWASQMFFADGGRVFTRTATNLEGTGWTNWAEIYSKQNKPTPQDIGALPTTGGELSGHLIMRPGQKFIGAHNYGFSCRTKEGSDDYVIYIDADNKVHVGYAGRPVKIDSLDIVNKNNKKIYHEDNKPTAADVGASPTNHTHDDRYLQSIKGEVLDFNDIKSPGTFTVGGNDIPNAPHTGSIYGTLLSMSKKGGEYNQLFINSTGLVYARFYNNQGYWTEWNKLYGSINKPRPSEIGAADSNHNHDNAYLGKTSTAANSNKLKNWELAEGNTNFIGIPFIPHDGVMEVGRMIDFHEPGTNKDFNTRLESINGALKCWQDFSAENLWARKYMRINDWYGGSEDGRFYYKQDGKGLYTENVENLYVKDSPVAKGDYWDVGDNTRVVSLGGGLRLVRQWIGTNASNSGGGVSYTIHFPKAWKWVIPISLVSDNMANANTYTSGYCTIDALSNVHLNGGCYQMVAGKSTRIHLTYLAAE
Physico‐chemical
properties
protein length:970 AA
molecular weight: 108029,11110 Da
isoelectric point:7,27206
aromaticity:0,10722
hydropathy:-0,62505

Domains

Domains [InterPro]
DC_1938
ATT
4–376
DC_1938 DC_1209 cd19958
Coil
Unmapped
23–57
Coil DC_1209 DC_1290
cd19958
STR
361–434
cd19958 cd19958
WAB24333.1
1 970
Architecture
ATT
STR
ATT 4-376 | STR 377-872 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WAB24333.1
1 970
Domain Start End Length (AA) Confidence
N-terminal 1 73 73 0,9670
Central domain 74 275 203 0,4461
C-terminal 276 970 694 0,4008
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-73
Central
74-275
C-terminal
276-970

Taxonomy

  Name Taxonomy ID Lineage
Phage Clostridium phage D1
[NCBI] 		2999104 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Clostridium perfringens
[NCBI] 		1502 cellular organisms > Bacteria > Bacillati > Bacillota > Clostridia > Eubacteriales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WAB24333.1 [NCBI]
Genbank nucleotide accession
OP753452.1 [NCBI]
CDS location
range 23002 -> 25914
strand -
CDS
ATGCCAAGTACTGGTAAAACTCCTACTCTAGGTTTAAATAAGTGGGAGTTAACAGATAAGCCAAAAATGAAGGATTTTAACAAGGACAATGAAAACATTGAGAACTTCGCTGCCGAACATAAACAGAAAATGACTGAGGTAGAAAAGAAGTCTAAGTCTAATGAGGATAGGCTAGATGCTTTAAGGGTTGGTACTATTAATAGGCTTGAGTGGTACAACTCTGAGTCTTATACTGGTCCTGGTAATATCACATCTATTACAGATGCTCCAACTAAGAGACGAGGTTTTAAATGGTCAGGTATGTCAACAGGCCCACAAACTCTTGAAATTAAAACTCTGCCTATAGAACCAAATAGTGATTATGTATTAGCCTTCTTAGAAGATATTGAAGGTAGTTTTACTAGCTATGAGATTAAACTGGCTTACACTAGTGGAGGCCAACAATATAAGAGCATTGTAAAACAAGGTAGTACACCACAGAGTAATGGGTATAAATTAAAAACTCATAAGTTCAGTATTCCTTCTGGAGCTACTGATACTAAAATTCAATTTGTGGTACAGGGTGCAACCTCAAGCACATCATTAAAGGTACTAAACCTATTACTAGCTAGAGGTAATGTAGTACCTGACTATAACCTAGCCCCTGAGGATGTACTGAAAAGACTAGACCTATTATTTGAGAAAGACACTAGTTTACAAAATCAAGTAAACCAAAAAGCTGCCAAAGTGGATGTGATCCAAAAGGTCGATGTACCTGTGGATAGGGATTGTAATTCCTTTAAAGCAGGAAACTCCTTCTGCTCCTTTGATACGGGGAATGGTGATTTTAAAAATACACCCGAGGGAACACTGGCCCAGGGGAGTGCTAGGGTATTTATTCTTAGAAATACAGGTTTAGGTGATGGTAAGAATAGGTTTCAACAGGAGTTTATTAATCTATATCCTAGCGATACTATCACTCGATATATTAGGAACTATGTATATGAGAGTAACACATGGGGAAAGTGGCATAAGGCCTATGATAGTGCCAATAAGCCTACTCCTGAAGAAATTGGTGCTTATTCTGCATATTTAGACATGAATGATACTGACTTAAATAATATTAAAATACCTGGAATATATAGTGGGTATAAAAACATGGCAAATGCTCCTTCTCAGGGTATATCAATTATGGAAGTTATTAGGTATAGCCCCGATTGGGTAGTACAGAGGTTTAAAACAATACCTCCAAATGGTAAGGGTATTACCTATACTAGAGGGTTTTATAATGGGAACACCTGGTCTGATTGGGTAAAGGTTTATGATGAGAATAACAGACCTACTCCCGCTGATATAGGGGCCTGGGATAAAACAGCCAAAAGACTAGAGGGTGTAGATCTAAACACCATTACAGAGGGGGGTATTTATTCTACAGTTAGAAATTCTGTCGATAGAAATGCCCCAATCTCAGCAGATGGGAGATTGATTGTTTTATCCTGGAATACAGGACACTGGGCTTCTCAAATGTTCTTTGCAGATGGTGGAAGAGTTTTTACTAGAACAGCTACAAACCTGGAGGGTACTGGATGGACGAATTGGGCTGAAATATATAGTAAACAAAATAAGCCCACTCCTCAGGATATTGGAGCTCTACCTACTACAGGGGGTGAGTTATCAGGCCATTTAATTATGAGACCAGGTCAGAAATTTATTGGAGCCCACAATTATGGATTTAGTTGTAGAACTAAAGAAGGCAGTGATGACTATGTGATATATATAGATGCTGATAACAAAGTTCACGTGGGGTATGCTGGAAGGCCTGTAAAGATAGACTCTTTAGATATTGTTAATAAGAATAATAAGAAGATCTATCATGAAGATAATAAACCAACAGCAGCAGATGTGGGGGCATCCCCAACTAACCATACCCATGATGATAGATATCTACAAAGTATTAAGGGAGAGGTTTTAGATTTTAATGACATTAAATCCCCAGGAACCTTTACAGTAGGGGGAAATGATATACCCAACGCCCCTCACACTGGAAGTATATATGGAACTCTTCTATCAATGAGTAAGAAGGGTGGAGAATATAACCAATTATTTATTAATAGTACTGGCTTAGTATATGCTAGGTTCTATAATAATCAAGGATATTGGACTGAATGGAATAAATTATATGGGAGTATTAACAAGCCTAGACCTTCTGAGATAGGAGCTGCAGACTCTAACCATAACCATGATAATGCTTACTTAGGTAAAACATCTACAGCTGCTAATAGTAATAAATTAAAGAATTGGGAGTTAGCCGAAGGCAATACCAACTTCATAGGTATTCCTTTCATACCCCATGATGGTGTTATGGAAGTGGGTAGAATGATTGACTTCCATGAACCTGGGACAAATAAAGACTTTAATACCCGATTAGAGTCTATTAATGGAGCTCTAAAATGCTGGCAAGATTTCTCAGCTGAAAACTTATGGGCCAGAAAATATATGAGGATAAATGACTGGTATGGTGGATCTGAGGATGGCAGATTCTACTATAAACAAGACGGAAAAGGGTTATATACTGAAAATGTAGAAAACCTCTATGTAAAAGATAGTCCTGTAGCCAAAGGGGACTATTGGGATGTAGGAGATAATACCCGAGTGGTTAGTCTGGGGGGAGGACTAAGGTTAGTTCGTCAGTGGATTGGTACTAATGCTTCCAACTCAGGTGGGGGGGTAAGCTACACTATTCACTTCCCAAAAGCATGGAAGTGGGTAATACCCATATCTCTAGTAAGTGATAATATGGCTAATGCTAATACCTACACCTCTGGATATTGTACTATAGATGCCCTATCAAATGTTCACCTAAATGGGGGATGTTATCAAATGGTTGCGGGTAAGAGTACACGAATACACTTAACTTACTTAGCAGCTGAGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
e11778f284ea818296493cf723f9b1db2a2b0bbfdd55ec34f686963bf46307a2
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6854
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Lytic bacteriophage isolates from reduced Clostridium perfringens induced lesions in necrotic enteritis challenged broilers Wu,S.-B. 2022-12-22 — GenBank