Protein

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Genbank accession
QNR53847.1 [GenBank]
Protein name
putative SGNH/GDSL hydrolase family protein
RBP type
TSP
Evidence RBPdetect
Probability 0,83
Protein sequence
MSCTQESPMKTRDDLIEAHNSIGFVGLLADGSLDNLILDLNEVDNTADFFKPFRPLSREFAIFGDSRTAQCHTVAATAFATENYGYAFWAAQVGNGFCPTTNNFGVGGDTTAQMLARISTVVASPADIILFMGGTNDRTGGMTVADTKRNILAIVRRLQKAGKIVIVANDTPRFASKALTAPQQLDHEAIRDWINIELSKITPVADTYSHIVPADLHDDLHPNVKGAYKIGALGFGPVLAKYIRLGVDLPTEATDLWSANNVTGSLTANPTMLGSVTQATGSVNPIAGSLVATGFKGAGSSFTGLTTQWSKEVALFGESQVIKFAGTPTTAGAYLAVSPTATFTLANVSAGNVISLMCAYDLVGDGAGILGVTAELLITKPVATVSTTIYYRDGDKYVDPHSMPAGTISGALDTQRYTVDGTETAIVARISVYFAQNVPQNSSIKLRQFAVRKHVA
Physico‐chemical
properties
protein length:456 AA
molecular weight: 48241,09580 Da
isoelectric point:5,76514
aromaticity:0,07895
hydropathy:0,08772

Domains

Domains [InterPro]
IPR036514
STR
44–242
IPR036514
IPR036514
STR
44–235
IPR036514 DC_0391
SSF52266
STR
55–231
SSF52266
IPR051532
Unmapped
59–232
IPR051532
IPR013830
ENZ
62–226
IPR013830
QNR53847.1
1 456
Architecture
STR
RBD
STR 44-242 | RBD 243-454 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QNR53847.1
1 456
Domain Start End Length (AA) Confidence
N-terminal 1 39 39 0,8234
Central domain 40 243 205 0,4102
C-terminal 244 456 212 0,9956
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-39
Central
40-243
C-terminal
244-456

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage phiK7A1
[NCBI] 		2759194 Uroviricota > Caudoviricetes > Vandenendeviridae > Torinovirus > Torinovirus K7A1
Host Pseudomonas syringae pv. actinidiae
[NCBI] 		103796 Bacteria > Proteobacteria > Gammaproteobacteria > Pseudomonadales > Pseudomonadaceae > Pseudomonas

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QNR53847.1 [NCBI]
Genbank nucleotide accession
MT740307 [NCBI]
CDS location
range 28472 -> 29842
strand +
CDS
ATGAGTTGCACACAGGAAAGCCCAATGAAAACCAGAGATGATTTAATCGAAGCCCACAATTCAATCGGCTTTGTGGGCCTTCTTGCAGACGGAAGTTTAGATAACCTAATACTGGATCTAAACGAAGTAGATAATACTGCCGACTTCTTCAAACCCTTCAGACCATTAAGCCGTGAGTTCGCCATCTTTGGTGATAGTCGCACTGCTCAATGTCATACAGTTGCAGCAACAGCCTTTGCTACAGAGAACTATGGGTACGCCTTCTGGGCTGCTCAAGTAGGTAATGGCTTCTGTCCCACAACAAACAACTTCGGTGTAGGTGGTGATACCACAGCTCAAATGCTGGCTCGTATCTCTACTGTTGTAGCTTCCCCCGCAGATATCATTCTGTTCATGGGTGGAACTAATGACCGGACTGGCGGGATGACAGTTGCTGACACTAAACGGAATATTCTAGCGATTGTACGACGCTTGCAGAAAGCAGGTAAGATCGTAATCGTTGCTAATGACACTCCCCGCTTCGCTTCTAAGGCTCTGACTGCTCCACAGCAATTAGACCATGAAGCTATTCGTGATTGGATCAACATCGAGTTGTCCAAGATCACACCAGTCGCTGATACATATTCTCATATCGTCCCAGCAGACTTACACGACGACCTCCATCCAAACGTCAAAGGTGCCTACAAGATTGGTGCATTAGGCTTTGGTCCTGTCCTCGCTAAGTACATCCGACTGGGTGTTGACCTCCCTACCGAAGCCACAGACCTCTGGAGCGCTAATAACGTCACAGGTAGCCTAACAGCTAACCCAACGATGTTAGGCAGCGTGACACAAGCCACAGGCTCTGTTAACCCTATTGCCGGAAGCTTAGTTGCTACTGGGTTCAAGGGTGCAGGCTCAAGCTTCACTGGACTCACTACACAGTGGTCTAAAGAAGTTGCTCTGTTCGGAGAATCACAAGTTATCAAGTTTGCAGGAACACCAACTACTGCTGGTGCTTACCTCGCTGTATCCCCGACCGCCACATTCACCCTTGCCAACGTATCAGCCGGTAACGTCATTAGTTTGATGTGTGCCTATGACTTGGTTGGTGATGGAGCTGGTATTCTGGGTGTAACAGCCGAACTTCTAATCACAAAGCCCGTAGCCACAGTATCCACAACTATTTATTACCGTGATGGTGATAAGTATGTAGACCCACACTCGATGCCTGCTGGGACAATCTCAGGAGCACTCGACACTCAGCGTTACACCGTTGATGGTACAGAGACAGCCATTGTTGCTCGTATCAGTGTCTACTTCGCTCAGAACGTTCCGCAGAACTCATCGATCAAACTTCGTCAGTTCGCTGTACGGAAACATGTAGCGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
1235700c6f92e8bc4670160b91d7acbfbc7146486add56c9329483aab34af67e
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7725
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50