Protein
View in Explore- Genbank accession
- UIS25127.1 [GenBank]
- Protein name
- tail fiber protein
- RBP type
-
TFTFTSP
- Protein sequence
-
MSFNTGNDLPSLDERDLYDNATNLDKAMNSTDPTWTDRFGVEKPTIDAALKSAGFMPAGFDFVTGGTLQPGDRNKAVYNPAPNGDNNWYRWNGSFPKEIAANSQPNPKDENNWVPVIFKSRFGRESDILQYMIGPNKVSITAHRGYWRFSTENSIKSITKAGMLGFDMVELDVEFTSDMVPVLLHDVTLDRTTSGTGSVRTKTFSELSGLYLTNDPDGDREPIPTFRDAVIACKKFGLSINIDWKFSGTWYDDDKYLRIVYDILIKEGYSHKSFFMINDHKNRLQMKNIDPTMSMGFLTTNPSDINIINTFYPGCLVGMRVGTSQTIIDQFLANKTPVYIYGCETHQQIEQALKSGASFIETNDFIPSGVI
- Physico‐chemical
properties -
protein length: 371 AA molecular weight: 41680,38860 Da isoelectric point: 5,06733 aromaticity: 0,11321 hydropathy: -0,42049
Domains
Domains [InterPro]
DC_1559
ATT
1–160
ATT
1–160
IPR040775
RBD
59–106
RBD
59–106
G3DSA:2.10.10.80
ATT
59–115
ATT
59–115
IPR017946
STR
137–364
STR
137–364
IPR030395
ENZ
138–371
ENZ
138–371
cd08566
ENZ
140–293
ENZ
140–293
IPR017946
STR
140–364
STR
140–364
IPR030395
ENZ
143–299
ENZ
143–299
1
371
Architecture
ATT 1-160 | STR 161-371
Legend:
ATT
STR
RBD
CBM
LEC
ENZ
CHP
LNK
TAS
TTP
UNK
Unmapped
Tail Spike Domain Segmentation
Tail Spike Domain Segmentation
This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.
Domain Layout
1
371
| Domain | Start | End | Length (AA) | Confidence |
|---|---|---|---|---|
| N-terminal | 1 | 261 | 261 | 0,6027 |
| Central domain | 262 | 360 | 100 | 0,4027 |
| C-terminal | 361 | 371 | 10 | 0,1864 |
Note: Constraints were applied during segmentation.
Fixed 106 C-terminal predictions appearing before Central domain|C-terminal too short, adjusted boundary
Fixed 106 C-terminal predictions appearing before Central domain|C-terminal too short, adjusted boundary
Legend:
N-terminal
Central domain
C-terminal
3D Structure with Domain Coloring
The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).
Domain Coloring
N-terminal
1-261
1-261
Central
262-360
262-360
C-terminal
361-371
361-371
Taxonomy
| Name | Taxonomy ID | Lineage | |
|---|---|---|---|
| Phage |
Aeromonas phage pAEv1810 [NCBI] |
2908744 | Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes |
| Host |
Aeromonas sp. [NCBI] |
647 | cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Aeromonadales |
Coding sequence (CDS)
Coding sequence (CDS)
Genbank protein accession
UIS25127.1
[NCBI]
Genbank nucleotide accession
OL964756.1
[NCBI]
CDS location
range 183886 -> 185001
strand +
strand +
CDS
ATGAGCTTTAATACAGGTAACGATTTACCGAGCTTAGACGAGCGTGATCTCTACGATAACGCTACTAATCTTGACAAAGCAATGAATAGCACTGATCCAACCTGGACAGATAGATTTGGAGTTGAGAAACCTACAATTGACGCAGCTTTGAAATCTGCAGGATTTATGCCAGCTGGTTTTGACTTTGTAACTGGCGGCACTCTTCAACCTGGAGATCGTAATAAAGCTGTTTATAACCCAGCACCTAATGGTGATAATAACTGGTATCGTTGGAATGGGTCGTTTCCAAAGGAAATTGCTGCTAATAGTCAACCTAATCCTAAAGATGAAAATAATTGGGTTCCTGTTATATTTAAATCTAGGTTCGGCAGAGAAAGCGATATTTTACAGTATATGATCGGACCTAATAAGGTTTCAATCACAGCTCATCGTGGATACTGGAGATTTTCTACTGAAAACTCTATTAAATCTATAACTAAAGCAGGTATGCTTGGTTTTGACATGGTGGAGTTAGATGTAGAGTTTACCTCTGATATGGTCCCTGTTTTGTTACATGACGTGACTTTAGATAGAACCACATCTGGTACTGGTAGCGTTAGAACAAAGACCTTTTCGGAACTTTCCGGTTTATACTTAACCAACGACCCGGATGGTGATCGTGAACCAATCCCTACATTCAGGGATGCTGTGATCGCATGTAAGAAGTTTGGTCTTTCGATTAACATAGATTGGAAATTTTCTGGGACGTGGTACGATGACGATAAGTATTTGCGTATCGTTTATGATATTTTAATTAAGGAAGGTTATAGTCATAAATCATTTTTCATGATTAATGACCACAAAAACCGGCTCCAAATGAAAAATATAGATCCAACGATGTCTATGGGATTTTTAACTACTAATCCTTCCGATATTAATATTATAAACACCTTTTATCCTGGATGTTTAGTTGGAATGAGAGTAGGAACCTCGCAAACCATCATAGATCAGTTTTTAGCTAATAAAACACCAGTCTACATCTATGGGTGTGAAACACATCAGCAGATTGAACAGGCGTTAAAATCTGGCGCTAGTTTTATTGAAACTAACGACTTTATACCTTCTGGAGTGATCTAA
Genome Context
Genome Context
Tertiary structure
PDB ID
7645408f02247349b6e1f22d5f607d71537c23858b5ea5f0aaf3f95cf7efb65b
Model Confidence
Very high
pLDDT > 90
pLDDT > 90
High
90 > pLDDT > 70
90 > pLDDT > 70
Low
70 > pLDDT > 50
70 > pLDDT > 50
Very low
pLDDT < 50
pLDDT < 50