Protein

View in Explore
Genbank accession
YP_009799947.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
Protein sequence
MQMRYKNKGEFEYMYPETLGDNVQLNNGQSLEEWKKQIDDLYNEKEDSDFNNIWSGSDILGGGSEITVLKPLKECNNGWILVFKEVSGVSGNVNYCYVPRVQPDLYSTFGIKFLVGVKGGGVRSKFLYITNTTIKGHSSNGAGGNEETELVKVISY
Physico‐chemical
properties
protein length:156 AA
molecular weight: 17483,41380 Da
isoelectric point:5,07529
aromaticity:0,11538
hydropathy:-0,49231

Domains

Domains [InterPro]
DC_1167
STR
2–156
DC_1167
Coil
Unmapped
31–51
Coil
YP_009799947.1
1 156
Architecture
STR
STR 2-156
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Staphylococcus phage phiSA_BS2
[NCBI] 		2126724 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Staphylococcus aureus
[NCBI] 		1280 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009799947.1 [NCBI]
Genbank nucleotide accession
NC_047948.1 [NCBI]
CDS location
range 70386 -> 70856
strand +
CDS
ATGCAAATGAGGTATAAAAATAAAGGTGAATTTGAGTACATGTATCCTGAAACATTAGGAGACAACGTACAATTAAACAATGGACAATCTTTAGAGGAATGGAAGAAACAAATAGATGATTTGTACAATGAGAAAGAAGATTCTGATTTTAACAATATATGGAGTGGGTCAGATATACTCGGAGGAGGCTCAGAGATAACAGTACTAAAACCTTTAAAAGAGTGTAATAATGGATGGATACTTGTATTTAAAGAGGTATCTGGGGTATCAGGTAACGTTAACTATTGTTATGTACCGAGAGTTCAACCTGATCTATATTCTACTTTTGGAATAAAATTTTTAGTAGGTGTTAAAGGTGGAGGTGTTCGTTCTAAATTTTTATATATTACGAACACAACAATAAAAGGACATAGTTCTAACGGTGCAGGAGGTAATGAAGAAACCGAATTAGTCAAAGTTATAAGCTATTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
55ce3060f839a22110360d2bfb7977883cf7da9353aa79dd6de44e07bcd75e56
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7921
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation,the biological characteristics and genomics of two new strains of lysate Staphylococcus aureus phage Jin,X., Zhang,C., Wang,X. and Zhong,J. 2021-10 — GenBank