Protein

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Genbank accession
GENB_d0271a02e8f4 [GenBank]
Protein name
receptor binding protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,88
Protein sequence
MISNNAPAKMVLNSVLTGYTLAYIQHSIYSDYDVIGRSFWLKEGSNVTRRDFTGVDTFSVTINNLKPTTTYEVQGAFYDSIIDSELLNAQIGINLSDKQTFKMKSAPRITGARCESEPVDVGVGAPIVYIDTTGEADYCTIELKNNSNADNPWVKYYVGALMPTIMFGGVPIGFYKVRISGQISLPDGVTIDSSGYYEYPTVFEVNYNFVPPTAPTNIEFKAARIADGKERYDLRVQWDWNRGAGANVREFVLSYIDSAEFARTGWTKAQKINVGAAQSATIISFPWKVEHKFKVSSIAWGPSKQDITDSAIQTFILKEDTPLDNNFVNETGIEVNYAYIKGKIKDGSTWKQTFLIDAATGAINIGLLDAEGKAPISFDPIKKIVNVDGSVITKTINAANFVMTNLTGQDNPAIYTQGKTWGDTRSGIWMGMDNATAKPKLDIGNATQYIRYDGDTLRISSGVVIGTPNGDIDIATGIQGKQTVFIYILGTSLPAKPTSPAYPPSGWSKTPPNRTSNTQNIYCSTGTLDPVTNQLVSGTSWSDVVQWSGTEGVDGRPGADGRPGANGQRGPGMYSLAIANLTAWNDSQANSFFTSNFGTGPVKYDVLTEYKSGAPGTAFTRQWNGSAWASPAMVLHGDMIVNGTVTASKIVANNAFLSQIGVNIIYDRAAALSSNPEGSYKMKIDLQNGYIHIR
Physico‐chemical
properties
protein length:694 AA
molecular weight: 75351,73960 Da
isoelectric point:5,64806
aromaticity:0,10375
hydropathy:-0,23573

Domains

Domains [InterPro]
IPR057550
STR
10–97
IPR057550 IPR057551 IPR057552 IPR057549
IPR057551
STR
104–196
IPR057551 DC_1191
GENB_d0271a02e8f4
1 694
Architecture
STR
STR
STR
STR 10-97 | STR 103-197 | STR 211-694
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
GENB_d0271a02e8f4
1 694
Domain Start End Length (AA) Confidence
N-terminal 1 409 409 0,8672
Central domain 410 659 251 0,1720
C-terminal 660 694 34 0,9103
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-409
Central
410-659
C-terminal
660-694

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage Kenya-K17
[NCBI] 		3027605 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
OQ291045.1_CDS_[complement(83145..85229)] [NCBI]
Genbank nucleotide accession
OQ291045.1 [NCBI]
CDS location
range 83145 -> 85229
strand -
CDS

  




        

        
      
    
  






  

  
  

    
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Tertiary structure


  



  

    

      
        
          
            
              

                

                  

                    

                      
PDB ID

                      
1dc78159839c2b227ca44d445ccf19a5aacff3fae883275e9924bf0c7086a56e

                    

                    
                      ESMFold
                    
                  

                  

                  

                    

                      Source
                      ESMFold
                    

                    

                      Method
                      ESMFold
                    

                    

                      Resolution
                      0,7903
                    

                    

                      Oligomeric State
                      monomer
                    

                    
                  

                  

                    
                      Download PDB
                    
                  

                  
                  
                  
                

                
                
                

                  

                    
                      
Model Confidence

                      

                        

                          

                          Very high
pLDDT > 90
                        

                        

                          

                          High
90 > pLDDT > 70
                        

                        

                          

                          Low
70 > pLDDT > 50
                        

                        

                          

                          Very low
pLDDT < 50