Protein

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Genbank accession
WNM55356.1 [GenBank]
Protein name
pre-neck appendage protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,87
Protein sequence
MADMKVFGGNNGGNKIKFANVNIHDSSVNIGIAGGAGVEGFGIYNANLTGSGKGNGIELYNHYAEIVGVDAVNYENAADIAGNKYEVVPTYMNGGASIASTGGGAISEQSAVLASSGGTFAYDKNSFVIASNLGSEAYGSRSGVINSSNSRTKKDGFAQTIMNSRSVESLGNYHFQMGYGDDEKPKASNTKFDVSAFSGNVRTAGYLKSGQDIGDIGEYFESKTGEKIENGYIVTLEGRYIRKAGPDDEPVGIVSGTAALVMGDQLFHHKSKYKKDEFGVVIKSVQMVENVDDEGNIHRELVELPVVNEDYDNQNEEDYIPRSQRDEWCVVGINGQIYTRIDETVENGDKITAMRGVGTKDNANGYYYVEEITTPYDAEKGYGVALVFVK
Physico‐chemical
properties
protein length:390 AA
molecular weight: 41900,60230 Da
isoelectric point:4,77393
aromaticity:0,09487
hydropathy:-0,44179

Domains

Domains [InterPro]
DC_0616
STR
1–159
DC_0616 IPR021865
G3DSA:2.160.10.20
RBD
91–207
G3DSA:2.160.10.20 G3DSA:2.40.300.10
G3DSA:4.10.80.40
RBD
268–317
G3DSA:4.10.80.40
WNM55356.1
1 390
Architecture
STR
RBD
STR 1-159 | RBD 160-390
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WNM55356.1
1 390
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,3120
Central domain 11 209 200 0,7796
C-terminal 210 390 180 0,9521
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-209
C-terminal
210-390

Taxonomy

  Name Taxonomy ID Lineage
Phage Staphylococcus phage S-CoN_Ph27
[NCBI] 		3076584 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Staphylococcus sp.
[NCBI] 		29387 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WNM55356.1 [NCBI]
Genbank nucleotide accession
OR354850 [NCBI]
CDS location
range 38782 -> 39954
strand +
CDS
ATGGCAGACATGAAAGTATTCGGTGGCAATAACGGTGGTAATAAAATCAAGTTTGCTAACGTTAACATTCACGACTCATCTGTGAATATCGGTATTGCAGGTGGTGCAGGTGTTGAAGGCTTTGGAATTTATAATGCTAACTTAACTGGATCCGGTAAAGGTAACGGAATAGAACTATACAACCACTACGCAGAAATTGTAGGTGTTGACGCAGTTAACTATGAAAATGCAGCAGACATCGCCGGCAACAAATACGAAGTAGTACCAACATACATGAACGGTGGCGCAAGTATAGCTTCAACAGGTGGCGGTGCTATTTCTGAACAAAGTGCAGTTCTAGCGTCTAGTGGTGGAACGTTCGCGTATGACAAAAACTCGTTTGTCATCGCTTCTAACTTAGGTTCAGAGGCTTATGGCTCACGTTCAGGTGTTATTAACTCATCTAATTCAAGAACTAAAAAAGACGGTTTTGCACAAACAATCATGAACTCAAGAAGTGTCGAGTCCTTAGGTAATTATCATTTCCAAATGGGTTATGGCGACGATGAAAAACCTAAAGCCTCAAACACTAAATTCGATGTATCGGCATTTAGCGGTAATGTAAGAACAGCAGGATATTTAAAATCAGGCCAAGACATCGGGGATATTGGCGAGTATTTTGAAAGTAAAACTGGAGAGAAAATCGAAAATGGTTATATTGTAACCTTAGAAGGTCGTTACATTAGAAAAGCTGGTCCAGATGATGAGCCGGTAGGTATCGTTTCAGGTACAGCCGCATTAGTTATGGGGGATCAATTATTCCACCATAAATCTAAATATAAAAAAGACGAATTCGGTGTTGTTATAAAATCTGTTCAAATGGTTGAAAATGTAGATGATGAAGGAAACATACACCGCGAACTTGTAGAGTTACCAGTCGTTAATGAAGATTACGACAATCAAAACGAAGAAGATTACATTCCTAGATCACAACGAGATGAATGGTGCGTTGTTGGTATCAATGGTCAAATTTATACAAGAATAGATGAAACTGTTGAAAACGGCGACAAAATAACTGCCATGAGAGGTGTAGGAACAAAAGACAATGCTAATGGCTATTATTACGTCGAAGAAATCACTACACCATATGACGCTGAAAAAGGTTATGGAGTAGCGTTAGTATTCGTTAAATAG

Genome Context

Genome Context

Tertiary structure

PDB ID
df9a6d49155067498fd69861330b46f59ce1dff161e54ba4e2d68b8557179806
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7643
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50