Protein

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Genbank accession
YP_011992007.1 [GenBank]
Protein name
lateral tail fiber protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,87
TF
Evidence UniProt/TrEMBL
Probability 1,00
Protein sequence
MALKTKIIVQQILNIDDTTTTASKYPKYTVVLGNSISSITAGELTAAVEASAASAAAAKDSEVAAKLSEINARDSENKAAIYADSSEASATQSATSATEAERQAGLSKDSADASAASATEAGTYKDAAELAAQNAEKSRELAEQAKTAAQQAQVAAETAKAGAETAETNAEASATTAGEHAAAAKQSELNAKTSETNAAAHEVEAGNQAGNATTEADRAKAEADRAAQVVDGKLDKVDISGFIKVYKTKAEADADVGSRVLGEKILVWNQTDSKYGWYKVAGTVEAPVLELVETEQKLVSINNVHADDAGNVQITLPGGNPSLWLGEVTWFPYDKDSGVGYPGVLPADGREVLRVDYPDTWEAIEAGLIPSVTEEQWQAGATLYFSTGNGTTTFRLPDMMQGQAFRAAAKGEENAGNIKEQIPYITMINGKAPADDGTITLGNAADKNVWNGVDGEVLLRGAFGLGGAGLILNEPDAVSFFKAIRAFGSGYYRNDNESNLVIPKYSAGFYSKVGDTHTFICSAYSNGVAFVASASDRDLDEESTVHTNILYGTANKPDLNNDTQGVLGVDKGGTGASDVTNARTNLQIERIKQQDNGTFIAGNLSTHGLFTRDNNSWGMMEFSSGATIPLDINAGGTGAKTIEGARNNLQLGITQNVQFANLNLTNSDNLAESNGGVLNSVLANPAGVTRALGRFFSELRSDGIPKVVIHSGNGADQNAYLSFFANGLLSGIDTLGVTNKTRTNTLAVADRMTLATPGDSNILGARSIALGDNDSGIKWDQDGHISTYSDGLQIFQWTPTTLNTYKVISSRVPNDGRGMYVYGTRTVGHNALIAGQVEGGGFGGWRDRATGLLVELTHQDAAFSIWKATKWGLDHQGSMDVVMYAGGGYETRLNVKGAFYSFNEAGYASCVQWVSTSDIRLKAQLKEIVSAKDKVKSLQGYTYFKRNNLEEDDNSFYSEEAGLIAQDVQTVLPEAVYKVSNTEYLGISYSGVTALLTNALKEMITDAEAQETRISKLEQEVQELKALVATLVNK
Physico‐chemical
properties
protein length:1034 AA
molecular weight: 109514,67790 Da
isoelectric point:4,76739
aromaticity:0,07157
hydropathy:-0,30899

Domains

Domains [InterPro]
DC_0608
ATT
2–556
DC_0608 IPR030392 Coil
Coil
Unmapped
125–155
Coil DC_0195
IPR030392
CHP
917–1014
IPR030392
YP_011992007.1
1 1034
Architecture
ATT
STR
ATT 2-556 | STR 557-1034
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_011992007.1
1 1034
Domain Start End Length (AA) Confidence
N-terminal 1 474 474 0,9347
Central domain 475 682 209 0,2178
C-terminal 683 1034 351 0,8048
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-474
Central
475-682
C-terminal
683-1034

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage GreteKellenberger
[NCBI] 		2851990 Uroviricota > Caudoviricetes > Demerecviridae > Epseptimavirus > Epseptimavirus gretekellenberger
Host Escherichia coli K-12
[NCBI] 		83333 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Escherichia

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_011992007.1 [NCBI]
Genbank nucleotide accession
NC_105113.1 [NCBI]
CDS location
range 20920 -> 24024
strand +
CDS
ATGGCACTTAAAACTAAAATTATTGTACAGCAGATTCTGAACATAGATGACACTACAACTACTGCTAGTAAGTATCCTAAATATACAGTAGTTTTAGGTAATTCTATTAGTTCTATTACTGCTGGTGAATTAACTGCTGCTGTAGAAGCCTCTGCTGCTTCTGCTGCGGCAGCAAAAGATTCCGAGGTAGCTGCAAAGTTATCGGAAATAAACGCTAGAGATTCAGAAAACAAAGCTGCTATATATGCTGATTCTTCAGAAGCTTCTGCAACTCAGTCTGCTACTTCTGCTACCGAAGCAGAGAGACAAGCTGGTTTATCTAAAGATAGTGCTGATGCCTCTGCAGCATCTGCTACTGAAGCAGGCACCTATAAAGATGCTGCTGAACTTGCTGCTCAAAATGCTGAGAAGAGTAGGGAACTAGCTGAACAAGCTAAAACTGCTGCTCAACAAGCTCAAGTAGCTGCAGAAACTGCAAAAGCTGGAGCTGAAACAGCTGAAACTAATGCTGAGGCTTCTGCTACTACAGCAGGAGAACATGCTGCTGCTGCTAAGCAATCAGAATTAAATGCTAAGACTTCTGAGACTAATGCTGCCGCTCATGAAGTAGAAGCAGGTAATCAGGCAGGTAATGCTACTACTGAAGCAGACCGTGCAAAAGCAGAAGCAGATCGTGCAGCACAAGTTGTTGATGGCAAGCTCGATAAAGTAGATATTTCTGGTTTCATCAAAGTTTATAAGACTAAAGCAGAAGCTGATGCTGACGTGGGTAGTCGTGTACTAGGTGAAAAGATCCTAGTGTGGAACCAAACTGATTCAAAATATGGCTGGTACAAAGTAGCAGGTACTGTGGAAGCTCCAGTTCTAGAGTTAGTAGAAACAGAGCAAAAGCTAGTCTCTATTAACAACGTTCACGCGGATGATGCAGGTAACGTACAGATTACTCTTCCAGGCGGTAACCCTTCTTTATGGCTTGGTGAAGTTACTTGGTTCCCATATGATAAGGATTCAGGCGTTGGATACCCTGGTGTTCTTCCTGCTGATGGTCGTGAGGTTCTACGTGTGGACTACCCAGATACTTGGGAAGCTATTGAGGCAGGTCTAATTCCTTCTGTTACTGAGGAACAATGGCAGGCTGGTGCAACACTCTACTTCTCCACGGGTAATGGTACTACTACCTTCCGCCTACCTGATATGATGCAGGGCCAAGCATTTCGTGCTGCTGCAAAAGGCGAGGAAAACGCTGGTAATATTAAAGAGCAAATTCCGTACATTACTATGATTAACGGTAAAGCTCCTGCTGATGATGGTACAATTACTTTAGGTAATGCTGCGGATAAAAACGTATGGAATGGTGTTGACGGCGAAGTATTACTAAGAGGTGCTTTTGGTCTTGGTGGTGCTGGTTTAATCCTTAATGAACCTGATGCTGTTTCCTTCTTCAAAGCAATACGTGCTTTTGGTTCTGGATACTATAGAAATGATAATGAGAGTAACTTAGTAATCCCTAAGTATTCTGCTGGATTCTATTCTAAAGTTGGGGATACTCATACCTTTATTTGTTCTGCTTATAGCAATGGTGTTGCTTTTGTAGCTTCTGCTTCTGATAGAGATTTAGATGAAGAATCTACAGTACATACTAATATCCTATATGGTACCGCGAACAAACCTGATCTGAATAATGATACTCAAGGAGTTTTAGGTGTAGATAAAGGGGGTACTGGTGCCAGCGATGTTACTAATGCTAGAACTAACCTTCAGATTGAACGTATTAAACAGCAAGATAATGGGACATTTATTGCAGGGAATTTGAGTACTCATGGTCTCTTTACTCGAGATAATAACAGCTGGGGGATGATGGAATTTTCTTCCGGTGCAACTATACCTTTGGATATAAATGCTGGGGGTACTGGTGCAAAAACCATAGAAGGAGCAAGAAATAATCTACAGCTAGGTATTACGCAAAATGTGCAGTTTGCTAACCTCAACTTAACTAATTCGGATAATTTAGCTGAATCAAATGGTGGTGTATTAAATAGTGTATTAGCTAATCCTGCTGGAGTAACTAGAGCACTTGGGAGATTTTTTTCTGAACTTCGGTCAGATGGTATACCTAAAGTCGTTATTCATTCAGGTAATGGTGCGGATCAGAATGCCTATCTTAGTTTTTTCGCTAATGGATTGCTATCTGGTATTGATACATTAGGTGTTACTAATAAAACTAGAACTAATACTTTAGCAGTAGCTGATAGAATGACTTTAGCAACCCCTGGTGATTCTAACATATTGGGGGCTCGATCCATTGCACTGGGAGATAATGATAGTGGAATTAAGTGGGACCAAGATGGACACATAAGTACTTACTCTGATGGTTTACAGATATTCCAGTGGACTCCTACAACTTTAAATACGTATAAAGTAATATCCTCTCGTGTACCTAACGATGGGCGTGGGATGTATGTATATGGTACTAGAACAGTTGGACATAACGCCCTAATTGCTGGTCAAGTTGAGGGGGGTGGATTCGGTGGATGGAGAGATAGAGCAACTGGTTTACTAGTTGAGTTAACCCATCAGGATGCAGCATTTAGCATATGGAAAGCTACAAAGTGGGGTTTAGATCACCAAGGAAGCATGGATGTTGTCATGTATGCCGGTGGTGGGTACGAAACTCGTCTTAATGTTAAAGGTGCTTTTTATTCCTTTAATGAAGCTGGTTACGCAAGCTGTGTTCAATGGGTAAGCACATCTGATATTAGATTAAAGGCACAATTAAAAGAAATAGTATCTGCAAAGGATAAAGTCAAGTCACTGCAGGGATACACGTATTTCAAACGTAATAATCTAGAAGAAGATGATAATTCCTTTTACTCTGAAGAAGCAGGTTTAATTGCTCAGGATGTTCAGACGGTTTTACCAGAAGCCGTGTATAAAGTATCAAATACGGAGTATCTCGGCATTAGTTATTCAGGCGTTACTGCATTACTTACTAATGCACTAAAAGAGATGATAACAGATGCGGAAGCTCAAGAAACCCGTATTAGCAAGTTAGAACAAGAAGTGCAAGAACTCAAAGCTCTAGTAGCCACTCTGGTAAATAAGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
26c51c976221f831f9dc925bc777f92d1d22448fd423da9313174925f8b6dc79
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5845
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Systematic exploration of Escherichia coli phage-host interactions with the BASEL phage collection Maffei,E., Shaidullina,A., Burkolter,M., Heyer,Y., Estermann,F., Druelle,V., Sauer,P., Willi,L., Michaelis,S., Hilbi,H., Thaler,D.S. and Harms,A. 2021 — GenBank