Protein

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Genbank accession
AOY11833.1 [GenBank]
Protein name
capsid-scaffolding protein
RBP type
TF
Evidence RBPdetect
Probability 0,90
Protein sequence
MSKQTGWIIVATAGATVDGRTITEAWIKDMAAQYSPDEYQALIWPEHFRSSWAPFDGKNWGTVDELKAAKKGNSLRLYAKITANDYLLLANKDGQKLFTSIEADPDYKGSGRCYLRGLAVTDSPASTGTTRLKFSIGTEEKQREYSQLESLVFTQDPDSTNPDTNEHDVKEAVAFFRGFKNLFGGLFGESAPHTNHTEPEDTDVTEEQLKAALAEQLKPFSDKLGALENKVNSFSQPAAGDNSQGDGGQPNAEQGEQGQGNEQPAQFNAEQLSKAFSDAINPVVEKLDGLENKFNALTQEAPGQRPDGTGGGETKVEAL
Physico‐chemical
properties
protein length:319 AA
molecular weight: 34673,58620 Da
isoelectric point:4,68253
aromaticity:0,08464
hydropathy:-0,72038

Domains

Domains [InterPro]
IPR009228
ENZ
7–238
IPR009228
AOY11833.1
1 319
Architecture
ENZ
ENZ 7-238 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Salinivibrio phage SMHB1
[NCBI] 		1897436 Uroviricota > Caudoviricetes > Peduoviridae > Playavirus SMHB1 >
Host Salinivibrio sp.
[NCBI] 		1886796 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AOY11833.1 [NCBI]
Genbank nucleotide accession
KX774374 [NCBI]
CDS location
range 15745 -> 16704
strand +
CDS
ATGAGCAAGCAAACTGGCTGGATTATTGTCGCAACTGCTGGCGCTACCGTTGATGGCCGCACCATTACCGAAGCATGGATTAAAGACATGGCGGCGCAATACTCACCCGATGAGTATCAAGCGCTAATCTGGCCAGAGCATTTCCGATCTAGCTGGGCGCCCTTTGACGGCAAGAACTGGGGCACCGTGGATGAACTCAAAGCAGCCAAGAAAGGCAACTCATTGCGCCTTTACGCAAAAATCACCGCCAACGATTACCTACTGCTTGCCAACAAAGACGGCCAAAAGCTGTTTACCAGCATCGAAGCAGACCCCGACTACAAAGGCTCTGGCCGTTGCTACCTGCGAGGCCTTGCTGTGACCGATTCCCCCGCCAGCACGGGCACCACGCGCTTGAAATTCAGCATTGGCACCGAAGAAAAGCAGCGTGAATACAGCCAGCTTGAAAGCCTTGTTTTTACCCAAGACCCAGACAGCACCAACCCAGACACCAACGAACACGACGTGAAAGAAGCCGTCGCGTTTTTCCGTGGATTTAAAAACCTATTCGGTGGGCTATTTGGGGAGAGCGCACCACATACCAACCACACCGAACCAGAGGACACCGACGTGACCGAAGAGCAACTAAAAGCCGCACTGGCTGAACAGCTAAAGCCGTTTAGCGACAAGCTGGGCGCACTTGAAAACAAAGTGAACTCGTTCAGCCAGCCAGCAGCCGGCGACAACAGCCAAGGCGATGGCGGCCAGCCAAATGCTGAACAAGGCGAACAAGGACAAGGCAATGAGCAACCAGCGCAGTTTAACGCGGAGCAATTGAGCAAAGCGTTTAGCGATGCCATCAACCCCGTTGTTGAGAAGCTCGATGGCTTGGAAAACAAATTCAACGCGCTAACCCAAGAAGCACCCGGACAGCGTCCGGACGGCACAGGTGGTGGCGAAACTAAAGTGGAGGCGCTGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
ef1fe7921eac1bd76fc4f7450f936ee6b9aae138aa79cec871b06f86eba0f8a4
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7651
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Salinivibrio phage SMHB1 Olonade,I.T., van Zyl,L.J. and Trindade,M.I. 2021-09-28 — GenBank