Protein

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Genbank accession
WMM95797.1 [GenBank]
Protein name
tail tubular protein B
RBP type
TSP
Evidence RBPdetect2
Probability 0,70
Protein sequence
MGGVVSQSIPNFLNGISQQTPTQRGINQAEEQVNLQNNIVDGLSKRPAFEYIDTIDATNVFPNTVKFWSIQRDKDNQFVVIFYNGGVKVYDLDGNEKPVTIASGASYLTSTNPKADFKLVNIADYTFIANKQTTVLADTNTSAAKIEEFYINVVTSNYGREYAVTVQHPNMSYAVKSSLQMPSGSNLNHDAVFRDTAHIADILFRGTSSTYFDASSDASFKLTREDTGATLSTTQGLGTSSEVTNYFTMSQYPGVIRGISTDGNANYTVLTADGSGNTGMYSIRDEISDFTKLPYHASTDSIIKVTGEDGDTLSDYYVKFETDGVWKETIGQGVSLGLNNSTLPHALINNNDGTFTFQEIDWDDRNAGDGITNSNPSFVGNQINNLLFYKNRLGMLSRDNLILSENAGFFNFFSKTVTQVLDTDPIDIAASGSEVNTLFDSVAFNESLLLFSEKAQYKLGSVGETISPTRAVLNEVSAFEFDANVKPVSAGKYAYFAQARNNNTAIREYYADDDTLTNDGLDITVSVQNLIPSNAYQLISNTTEDTLITLASDTADTQTAPYTTGTDITSINGGTMFIYKYFFDKGEKVQTAWSKWTFDNAKILGGMSFESFVYLLVVEGTDTKLIKIDLRNLKDSTIGFNIYLDLRKNVTGTYDANTDLTTFTAPYGAKTGLIAVDGVNGNNYAVTNTSGSTHTIEGNHTNLIIGIPYESKYRMSQQYVRENSGRGLVAITSGRYQIRNISLNYETSGYFQVEVTPNGRSTSYSFMNGYVIGTATSKVGVPAISSGTIKVPVSCRNTDFTLDIKSSSHLPMYIASAEVEGYYHNRSQRI
Physico‐chemical
properties
protein length:830 AA
molecular weight: 90971,51910 Da
isoelectric point:4,77490
aromaticity:0,10723
hydropathy:-0,30084

Domains

Domains [InterPro]
IPR058003
TTP
4–830
IPR058003
Coil
Unmapped
26–46
Coil
WMM95797.1
1 830
Architecture
TTP
TTP 4-830
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WMM95797.1
1 830
Domain Start End Length (AA) Confidence
N-terminal 1 164 164 0,8355
Central domain 165 363 200 0,5663
C-terminal 364 830 466 0,4360
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-164
Central
165-363
C-terminal
364-830

Taxonomy

  Name Taxonomy ID Lineage
Phage Pelagibacter phage HTVC142P
[NCBI] 		3072837 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Candidatus Pelagibacter sp. HTCC7211
[NCBI] 		439493 Pseudomonadota > Alphaproteobacteria > Candidatus Pelagibacterales > Candidatus Pelagibacteraceae > Candidatus Pelagibacter >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WMM95797.1 [NCBI]
Genbank nucleotide accession
OR420754 [NCBI]
CDS location
range 18669 -> 21161
strand +
CDS
ATGGGTGGAGTAGTATCTCAGAGTATTCCTAATTTTCTGAATGGTATCTCACAACAAACCCCAACACAGAGAGGTATCAATCAAGCAGAAGAACAGGTAAATTTACAAAACAATATTGTAGATGGTTTATCTAAAAGACCTGCTTTTGAATATATAGACACTATAGATGCTACAAATGTATTTCCCAACACTGTAAAATTTTGGTCTATACAAAGAGATAAAGATAATCAATTTGTCGTTATATTTTATAATGGTGGTGTAAAAGTTTATGATTTAGATGGTAATGAAAAACCTGTTACAATAGCAAGCGGTGCTAGTTATTTAACTTCAACTAATCCTAAAGCAGATTTTAAATTAGTTAACATTGCAGACTACACTTTTATTGCAAATAAACAAACTACAGTATTAGCAGATACAAATACAAGTGCAGCAAAGATAGAAGAATTTTATATCAATGTTGTTACATCTAATTATGGTAGAGAATATGCTGTAACAGTACAACATCCTAATATGTCTTATGCTGTTAAGTCTTCTTTACAAATGCCTTCAGGTTCTAATTTAAACCATGATGCCGTATTTAGAGATACAGCACACATTGCAGATATTTTATTTAGAGGTACTTCTAGTACATATTTTGATGCTTCATCAGATGCTTCATTTAAATTAACTAGAGAAGACACAGGTGCAACTTTAAGCACAACACAAGGATTAGGAACATCTTCTGAAGTAACTAATTATTTTACTATGTCTCAATATCCCGGTGTTATTAGAGGTATTTCAACAGATGGTAACGCTAATTATACAGTATTAACAGCTGATGGTTCTGGTAATACAGGTATGTATTCTATAAGAGATGAAATATCTGACTTTACAAAATTACCTTATCATGCAAGCACAGACAGTATTATAAAAGTTACAGGTGAAGATGGAGATACACTATCAGATTATTATGTAAAATTTGAAACAGATGGTGTTTGGAAAGAAACTATAGGTCAAGGTGTAAGTCTTGGTTTAAATAATTCTACGTTGCCACATGCTTTAATAAATAATAATGATGGTACATTTACATTTCAAGAAATAGATTGGGATGATAGAAATGCGGGTGATGGAATTACAAACTCTAACCCAAGTTTTGTAGGAAACCAAATTAATAATTTATTGTTTTATAAAAATAGATTAGGGATGCTTTCAAGAGATAATTTAATTTTATCTGAAAATGCAGGTTTTTTTAATTTCTTTTCTAAAACAGTTACACAAGTATTAGACACAGACCCAATTGATATTGCAGCTTCAGGTTCTGAAGTTAATACACTATTTGATAGTGTTGCATTTAATGAAAGTTTATTATTATTTTCTGAAAAAGCACAATACAAATTAGGAAGTGTTGGAGAAACAATATCTCCTACAAGGGCAGTACTTAATGAAGTTTCAGCATTTGAATTTGATGCTAACGTAAAACCTGTATCAGCAGGTAAGTATGCATATTTTGCACAAGCAAGAAATAATAATACAGCAATTAGAGAGTATTATGCAGATGATGATACACTAACTAATGATGGTTTAGATATTACAGTATCAGTACAAAATTTAATACCAAGTAATGCATATCAATTAATTAGTAATACAACTGAAGATACTTTAATTACATTAGCTTCAGACACAGCAGACACACAAACAGCACCTTATACTACAGGTACAGACATTACATCAATTAATGGTGGTACTATGTTTATATATAAATACTTTTTTGATAAAGGTGAAAAAGTACAGACTGCATGGTCTAAGTGGACATTTGATAATGCTAAAATATTAGGTGGTATGTCTTTTGAAAGTTTTGTTTATTTATTAGTAGTAGAAGGAACAGATACTAAATTAATAAAAATTGATTTAAGAAATTTAAAAGATAGCACTATAGGTTTTAATATATATTTAGATTTAAGAAAAAATGTTACAGGAACATATGATGCTAATACAGATTTAACTACGTTTACAGCGCCGTATGGAGCTAAAACAGGTTTGATTGCAGTTGATGGTGTTAATGGAAATAATTATGCTGTTACAAATACTTCAGGTTCTACACACACAATAGAAGGTAACCATACAAATTTAATTATTGGTATTCCATATGAAAGTAAATATAGAATGTCACAACAGTATGTTAGAGAAAATTCAGGAAGAGGCTTGGTAGCAATAACATCAGGTCGTTATCAAATTAGAAACATATCATTGAATTATGAAACTTCAGGTTATTTTCAAGTTGAAGTAACACCTAACGGTAGAAGCACAAGTTATTCATTTATGAATGGATATGTTATTGGAACAGCTACAAGTAAAGTAGGTGTACCGGCTATTAGTTCAGGAACTATTAAGGTACCCGTTTCATGTAGGAACACAGATTTTACATTAGATATTAAAAGTTCTTCACACTTGCCAATGTATATTGCTAGTGCAGAGGTAGAAGGATATTATCATAATCGTTCACAAAGGATTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
803f919044f63e0285f0fc710ce5e7909513c71f5a7fb75434c6dd2bcb571864
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,3051
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50