Protein

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Genbank accession
URY10686.1 [GenBank]
Protein name
non-contractile tail tubular protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MALISQSIKNLKGGISQQPDILRYPDQGSRQVNGWSSETEGLQKRPPMVFLKTLGGSGDLGQAPYIHLINRDENEQYYAVFTGAGIRVFDLAGNEKQVRYPTDGASYITTSNPRNDLRMVTVADYTFIVNRNVRVARNPNSVNLAGFNPKKDALINVRGGQYGRTLQIQINGGTQASYQIPDGSQPAHVNNTDAQWLAEELARQLRANTPGWTFNVGQGFIHIIADAAGEINSLVTKDGYADQLINPVTHYAQSFSKLPPNAPDGYMVKIVGDASKSADQYYVRYDATRKVWVETLGWNVNNQLMYETMPHALVRAADGNFEFRWLEWNPKTCGDDDTNPWPSFMDSTINDVFFFRNRLGFLSGENIILSRTAKYFNFYPASIANLSDDDPIDVAVSTNRIAILKYAVPFSEELLIWSDEAQFVLTASGTLTSKSVELNLTTQFDVQDRARPFGIGRNVYFASPRSSFTSIHRYYAVQDVSSVKNAEDITAHVPNYIPNGVFSICGSGTENFCSVLSHGDPSKIFMYKFLYLNEELRQQSWSHWDFGANVQVLACQSINSDMYIILRNEFNTFLARVSFTKNAIDLQGEPYRAFMDMKIRYTIPSGTYNDDTFTTSIHIPAIYGANFGRGKITVLEPDGKITVFEQPTAGWSNDPWLRLSGNLEGRTVYIGFNINFVYEFSKFLIKQTADDGSTSTEDIGRLQLRRAWVNYEESGTFDIYVENQSSNWKYTMAGARLGSNTLRAGRLNLGTGQYRFPVVGNAKFNTVSILSDETTPLNIIGCGWEGNYLRRSSGI
Physico‐chemical
properties
protein length:795 AA
molecular weight: 89082,63120 Da
isoelectric point:5,81823
aromaticity:0,11950
hydropathy:-0,35220

Domains

Domains [InterPro]
IPR058003
TTP
1–795
IPR058003
URY10686.1
1 795
Architecture
TTP
TTP 1-795
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
URY10686.1
1 795
Domain Start End Length (AA) Confidence
N-terminal 1 140 140 0,9945
Central domain 141 349 210 0,2164
C-terminal 350 795 445 0,2099
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-140
Central
141-349
C-terminal
350-795

Taxonomy

  Name Taxonomy ID Lineage
Phage Shigella phage ESh1
[NCBI] 		2950757 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Shigella sp.
[NCBI] 		625 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
URY10686.1 [NCBI]
Genbank nucleotide accession
ON528715 [NCBI]
CDS location
range 30722 -> 33109
strand +
CDS
ATGGCACTCATTAGCCAATCAATCAAGAACTTGAAGGGTGGTATCAGCCAACAGCCGGACATCCTTCGTTATCCAGACCAAGGGTCACGCCAAGTTAACGGTTGGTCTTCGGAGACCGAGGGCCTCCAAAAGCGTCCACCTATGGTTTTCCTTAAGACACTTGGAGGCAGCGGTGACTTGGGGCAAGCACCTTACATTCATCTTATTAACCGCGATGAGAACGAACAGTATTACGCTGTGTTCACTGGCGCAGGAATCCGAGTGTTTGACCTTGCCGGTAACGAGAAACAGGTACGATACCCAACAGACGGTGCTTCGTACATCACTACTTCAAACCCAAGGAATGACTTGAGGATGGTAACTGTAGCTGACTATACGTTCATCGTTAACAGAAACGTAAGGGTAGCGCGTAATCCCAACTCGGTAAACCTTGCTGGGTTCAACCCTAAGAAGGACGCATTAATCAACGTTCGTGGCGGTCAATATGGTAGGACACTACAGATTCAGATAAACGGTGGAACCCAAGCAAGCTACCAGATTCCTGATGGCTCACAGCCAGCGCATGTTAATAACACAGACGCCCAATGGCTCGCTGAGGAACTTGCGCGACAACTTCGGGCAAATACTCCCGGATGGACCTTTAACGTTGGGCAGGGTTTCATTCACATTATTGCAGACGCTGCTGGTGAGATTAACTCTCTAGTGACTAAGGATGGTTATGCTGACCAGTTGATTAATCCTGTTACTCACTACGCGCAGTCGTTCTCTAAGTTGCCACCTAACGCTCCTGATGGGTACATGGTGAAAATCGTAGGGGATGCGTCCAAGTCTGCTGACCAATATTACGTTAGATATGATGCTACTCGCAAAGTATGGGTTGAGACATTGGGGTGGAACGTTAACAATCAGCTTATGTACGAAACGATGCCTCACGCATTGGTGCGTGCTGCTGACGGTAACTTTGAGTTCAGATGGCTTGAGTGGAACCCTAAAACCTGTGGTGACGACGATACGAACCCATGGCCTTCCTTCATGGACTCCACAATCAACGATGTGTTCTTCTTCCGTAACCGTTTAGGTTTCCTTAGTGGGGAGAATATCATCCTGAGTAGAACCGCTAAGTACTTTAACTTCTACCCAGCGTCAATCGCGAACTTGAGTGACGATGACCCTATTGACGTGGCTGTAAGTACCAACCGAATAGCAATCCTTAAGTATGCCGTTCCGTTCTCAGAAGAGTTACTCATCTGGTCCGATGAAGCACAATTCGTCCTGACTGCTTCCGGCACCCTAACGTCGAAGTCAGTTGAGTTGAACCTGACGACCCAGTTTGATGTGCAGGACCGAGCGAGACCTTTTGGGATTGGGCGTAATGTCTACTTTGCTAGTCCGAGGTCCAGCTTCACGTCCATCCACAGGTACTACGCTGTGCAGGATGTAAGCTCCGTTAAGAACGCCGAGGACATTACAGCACACGTTCCTAACTACATCCCAAATGGTGTGTTTAGTATTTGTGGTAGTGGTACGGAAAACTTCTGTTCGGTACTATCTCACGGTGACCCTAGCAAAATCTTCATGTACAAATTCCTGTACCTGAACGAAGAGTTACGGCAACAGTCGTGGTCTCACTGGGACTTTGGGGCAAACGTGCAGGTTTTGGCGTGTCAGAGCATCAACTCAGATATGTACATTATCCTACGTAACGAGTTCAATACGTTCCTTGCGAGAGTTTCCTTTACGAAGAACGCCATTGACTTACAGGGAGAACCTTATCGGGCCTTTATGGACATGAAGATTCGCTACACGATTCCTAGTGGAACATACAATGATGACACGTTCACTACCTCTATCCATATTCCAGCCATTTATGGCGCGAACTTCGGGAGAGGCAAAATAACTGTATTGGAGCCTGATGGTAAGATAACCGTATTTGAGCAACCTACGGCTGGGTGGAGCAATGACCCATGGTTGAGACTAAGTGGTAATTTAGAGGGACGAACTGTATACATTGGGTTCAACATTAACTTCGTCTATGAGTTCTCTAAGTTTCTCATCAAGCAGACTGCCGACGACGGGTCTACCTCCACGGAAGACATTGGTCGCTTACAGTTACGCCGAGCGTGGGTTAACTATGAGGAATCTGGTACGTTCGACATTTATGTTGAGAACCAATCATCCAATTGGAAGTATACAATGGCTGGTGCTCGCTTAGGCTCTAACACTCTGAGGGCTGGGCGATTGAACTTAGGGACAGGCCAATACAGATTCCCTGTGGTTGGTAATGCAAAGTTCAATACCGTGTCCATCTTGTCTGACGAGACTACCCCGTTGAACATCATTGGATGTGGCTGGGAAGGTAACTACTTACGGAGAAGTTCCGGTATTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
08c0f88f19b2f38d48c4c875246758df798bcc7025d287be0bb6024e8523d464
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,3286
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Design of a bacteriophage cocktail active against Shigella species and testing of its therapeutic potential in Galleria mellonella Filippov,A.A., Su,W., Kevorkian,R.T., Sergueev,K.V., Srijan,A., He,Y., Lurchachaiwong,W., McGann,P.T., Ellison,D.W., Swierczewski,B.E. and Nikolich,M.P. — — GenBank