Protein

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Genbank accession
QBX06344.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence RBPdetect
Probability 0,71
Protein sequence
MADNPIIPDSMLKNWQDGEIVKAKDYVREREVLKVGINTTHDELHTHMSLAVKESPDKTRDKHISDKDFSDIQGKLREHDKTLTDHTVMLDMHGKTLKRKANIEDVVDNVTFQSEMLKKVDNNVTSNYIGKWKGLEPEDFEAGSQAQDILALKIGKLDKSGGIMTGSVKLQGSADIERVKDSKTMGRIYYDDSLSLWKVTNDNVNSFPIASQYQVQDQQIKINDLTTNKADKQVVTNLSSIVEKKLDKSIFDTFKKSRFVASGTQTLRTTIPARTYVYLRFQETTGTGFSAPSGGDAFTFTPSSAGDFLILAFVCLVAPLKGAPHALNYGLYDFAAGNTRLLPLQNTYIYGDYGGNTAVAVHLKANQQVGIRVLCSEAIDLQACYMQVVKLS
Physico‐chemical
properties
protein length:392 AA
molecular weight: 43559,91930 Da
isoelectric point:6,76312
aromaticity:0,07653
hydropathy:-0,39133

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QBX06344.1
1 392
Domain Start End Length (AA) Confidence
N-terminal 1 173 173 0,9940
Central domain 174 372 200 0,0462
C-terminal 373 392 19 0,9957
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-173
Central
174-372
C-terminal
373-392

Taxonomy

  Name Taxonomy ID Lineage
Phage Paenibacillus phage vB_PlaP_API480
[NCBI] 		2530020 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QBX06344.1 [NCBI]
Genbank nucleotide accession
MK533143 [NCBI]
CDS location
range 9164 -> 10342
strand +
CDS
GTGGCCGATAATCCTATAATTCCTGATAGCATGCTAAAGAACTGGCAGGATGGGGAAATTGTAAAAGCTAAAGATTATGTACGTGAAAGAGAAGTTCTAAAAGTTGGCATAAACACGACCCATGATGAGCTTCACACTCATATGTCCTTAGCTGTTAAAGAATCTCCCGACAAGACAAGAGATAAACACATATCAGATAAAGATTTCTCAGACATTCAAGGCAAGCTTAGAGAGCATGACAAAACCCTCACGGACCATACTGTAATGCTTGACATGCATGGAAAAACATTAAAGAGAAAGGCAAACATTGAGGATGTTGTAGACAATGTTACCTTCCAGTCAGAGATGTTAAAAAAGGTAGATAACAATGTAACTTCCAATTATATCGGAAAATGGAAAGGACTTGAGCCGGAAGACTTTGAAGCTGGTAGTCAAGCACAAGATATTCTTGCTTTAAAAATAGGTAAGCTAGATAAATCCGGTGGAATCATGACAGGTTCCGTTAAGCTTCAGGGTTCTGCTGATATAGAAAGAGTCAAAGATTCAAAAACAATGGGCAGAATATACTATGATGATTCCTTATCTTTATGGAAAGTAACAAACGATAATGTAAACTCTTTCCCCATAGCGTCCCAATATCAAGTTCAAGACCAGCAGATTAAGATCAATGATCTGACTACAAATAAAGCAGATAAGCAGGTTGTTACCAATCTAAGCAGCATTGTTGAAAAAAAGCTTGATAAATCTATTTTTGATACGTTTAAGAAAAGCAGATTTGTAGCTTCAGGAACTCAGACCCTACGCACTACAATCCCCGCAAGAACTTATGTTTACCTAAGATTTCAAGAAACAACTGGAACCGGGTTTTCAGCACCTAGTGGTGGTGATGCCTTTACCTTCACCCCTTCCTCAGCAGGGGATTTCCTAATATTAGCTTTTGTTTGTTTAGTGGCACCGTTAAAGGGCGCGCCGCATGCTTTGAACTACGGGTTGTATGACTTTGCAGCAGGCAATACACGCCTCCTACCACTACAAAATACTTACATCTATGGGGACTATGGTGGAAATACCGCAGTTGCAGTTCATTTGAAAGCTAATCAGCAAGTCGGAATTCGTGTACTTTGTTCTGAAGCTATAGATTTGCAAGCTTGCTATATGCAGGTTGTTAAACTTAGCTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
f8900a1202ff4721c847a0bf827d6e39466586056af85b016cd072c72b100230
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7674
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterization of a new podovirus infecting Paenibacillus larvae Ribeiro,H.G., Melo,L.D.R., Oliveira,H., Azeredo,J. and Oliveira,A. — — GenBank