Protein

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UniProt accession
A0A1B4XWX6 [UniProt]
Protein name
Tail collar domain
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,71
Protein sequence
MDNLQSSGLNLRNIKLRDLNTLVSDIQYNFQQIVQLPGFKGVTGKDGLSITGATGERGNKWVFANSASFITEYVTVTTSGQVTLNFLNSQLTADLARLLTTLGIDKLVGNDIIVLPSRDVIQFSSLTNEFVSTGIRFADGLSLNEEEVIEIINEVLGGLNNNDVYGIYKGIIKNYADNSAGLNNQSNYNSIIDLPVSGSGIGLETNDFIFSAIKEANIGNGVNTMFLTGSPKDYHNLAQKTLTNKTVDYMAGVDDFGALAVLQNSYKNGILIGHKDSNDFSTWGRIFRTENKLRFLSDYDPKLDEVGRLDLAKSGTVLFSPKDLQLMIKNGVLKMTDYKTNYDWLDATSERMVLGNANLPYVSIYSKNYAKLYTSIGANTQILGLYGNELKASIFQPKNDLLVNDQNLLVTHNILFDIKEDLETWIDDLDDRVSILESQNVYRQQTRLVGNANANLLTQFGLYDIRYNSSASYTNFPNNTLSNGFATNAYLKVNRFDEGTNVVIEQEYVNKSASNNYLVTSKRQGISNDSGSTFTWSNWTVLLDSRNSLFKGDGLSIVIENETFGDSGKLVIKHKAGVGSKVEAENPTTDSHKVVRGLNLDSSGHPTSVIAQDLDEWYYDKIEIDKLLRSNLPIGTIVIWSGNPNTIPAGFILCDGNNDTPNYGGRFLVGYDATNTDYNVVGARGGEAFVTLTKAQMPIHSHGGVTGSGGVHDHTIRFRYSGAEQDNQIGFLQPEWWTDQTNMGESGGNGTDNGYVNVTIPSSDAHNHTIQSEGGGQAHENRPPYEVVCFIMFVGFGVPSVTSPTNLSTTVGLPFSVVPDSIGVVTSWSATNLPLGLSINPTTGEISGIPTTPSNNEVTLIATNSNGSSAPYKFFINVEPFLGSVPVITSGNVIDVEVGQSFSYRITASGDPTSFGATGLPSWMSLDTTTGFITGTVPLGTPQSLFEINVSAINGSGTGSQNVSVIVTSLATINAPLLIGGGLTRSFYTGESVSYSHINGGGTATNWSALGLPTGLSINASTGRITGTINFAYSGETFNVQVTASNAAGISTISYNIYVYSDFGGDFRIN
Physico‐chemical
properties
protein length:1070 AA
molecular weight: 115472,02220 Da
isoelectric point:4,79723
aromaticity:0,09252
hydropathy:-0,17028

Domains

Domains [InterPro]
DC_2211
STR
1–627
DC_2211 SSF88874 IPR013783 IPR013783 DC_2153
cd22641
STR
630–719
cd22641 PF05345 IPR015919 IPR013783
IPR015919
STR
799–880
IPR015919 PF05345 IPR015919
PF05345
RBD
989–1056
PF05345
A0A1B4XWX6
1 1070
Architecture
STR
STR
STR 1-792 | STR 796-1063 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
A0A1B4XWX6
1 1070
Domain Start End Length (AA) Confidence
N-terminal 1 209 209 0,9684
Central domain 210 441 233 0,0943
C-terminal 442 1070 628 0,2055
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-209
Central
210-441
C-terminal
442-1070

Taxonomy

  Name Taxonomy ID Lineage
Phage Tenacibaculum phage pT24
[NCBI] 		1880590 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Tenacibaculum sp.
[NCBI] 		1906242 cellular organisms > Bacteria > Pseudomonadati > FCB group > Bacteroidota/Chlorobiota group > Bacteroidota

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Genome Context

Genome Context

Gene Ontology

Description Category Evidence (source)
GO:0016020 membrane Cellular Component IEA:InterPro (UniProt)
GO:0005509 calcium ion binding Molecular Function IEA:InterPro (UniProt)

Tertiary structure

PDB ID
22dad20e364bc6db2f5195cb0279d5c6a82050a41d4e3d188a8854bf8f3b97c1
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5645
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50