Protein

View in Explore
Genbank accession
QZI86709.1 [GenBank]
Protein name
central tail fiber J
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect2
Probability 0,90
Protein sequence
MKLRHDSTVFSGIPTLKVTVEGKRVKDFRTGQMVYTNNAALVIADFYINYMNIPESRLLMSGTGSFIDAANLCDENMPDGNKRYEINGMFELDAKPSDILNEMLKSCGGTLIRMNGVIGLLPAAYYGDVDPFVISESDIVGGISMSPQESLSDCVNIMSGTYVEEEDDWSEQDFPPIRDEAAIVRDGFEVSDDVDYAFVTNALQAQRLVNIELRRRTAGGFTELTMSPKGAYCRVGRVVEMNLPQLNLSGEFRITSQVENSDLTFTITMQRDDIEIYDDAIGEPYSPPPLLDLGGGTLASPSGLQFVYSYNDAVGNVIQGVLTWQNNSASTSYFNVVITNDDGDIVQTGDAKGYVFNVNALPIGNYLGKVRAVDSRGRTSSYATTSFSVGEPKVPASFRDISAPDDGQVHSLYARSNWNIAITPNIIGGTPQGTEFEFWHLADSGSYISGHPEYDEGSINLATLVATASSLNNGGLIPDRWQHYWVRSVNPYGKSDFIYLQTGTAKEQDLVTTVVERLKAIEVESQNWLADPDTNWSEYGYKLFSAATGVVTMPDGTVLENPDGLAVFQNIIANGHITAKTLTFVDADSIPPEIDNKNVKVEQVIAIPNASSYTNQSESSSNGEIYIHGKGGDKDFTITFEGGSLTIDPNQVNNSIAESYMIGCRKDGSDAFDSTRKFVAITGNVSDGFLAKYYLDGAQAKSITDPEDWVVFGWATNSSAEFVESVTVQSNAVELLNATATPVYNDNWIYPDQSSIQIKSSNYSSGSSGWAIDKYGNSEFNNIVARGDGYFNNGWFKGTVYADKISGDVVSALVLSASSKTAGAGWTTFDSVKVNGSSSKTRRLVVTVALKASSSRSGTGNSGAVQAKGRVRLTGSFGTVYSQYLETPTDYHSDQDGGTTSVINQTEVTLIVTVPANTTGTATVQVDAEYGSIVVSGTSGNLWIAQLMPNGSDLGS
Physico‐chemical
properties
protein length:956 AA
molecular weight: 103250,01670 Da
isoelectric point:4,45887
aromaticity:0,09414
hydropathy:-0,23944

Domains

Domains [InterPro]
DC_0754
STR
1–937
DC_0754
IPR057587
ATT
417–509
IPR057587
QZI86709.1
1 956
Architecture
STR
ATT
STR
STR 1-416 | ATT 417-509 | STR 510-937 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QZI86709.1
1 956
Domain Start End Length (AA) Confidence
N-terminal 1 595 595 0,9045
Central domain 596 805 211 0,7098
C-terminal 806 956 150 0,9890
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-595
Central
596-805
C-terminal
806-956

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage 82E32.1
[NCBI] 		2859294 No lineage information
Host Vibrio crassostreae
[NCBI] 		246167 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QZI86709.1 [NCBI]
Genbank nucleotide accession
MW865342.1 [NCBI]
CDS location
range 13 -> 2883
strand +
CDS
ATGAAGCTAAGGCATGACAGCACGGTCTTTTCTGGCATTCCAACACTAAAGGTCACAGTTGAAGGTAAGCGCGTTAAGGACTTCCGAACAGGTCAGATGGTTTACACAAACAACGCCGCTCTGGTTATCGCTGACTTCTACATCAACTACATGAACATTCCAGAGTCACGACTATTAATGAGCGGTACTGGTAGCTTTATTGATGCAGCAAACCTTTGTGATGAGAATATGCCAGATGGTAATAAGCGATACGAGATCAACGGTATGTTTGAGCTTGACGCTAAGCCTAGTGATATTCTGAATGAGATGCTTAAGTCATGCGGCGGCACACTTATTCGAATGAATGGTGTCATTGGCCTGCTTCCTGCTGCTTACTATGGTGATGTAGATCCGTTTGTTATTAGCGAGTCCGATATTGTCGGTGGTATCTCAATGTCTCCACAAGAATCACTAAGTGACTGTGTGAACATTATGTCAGGAACATACGTTGAGGAAGAGGATGACTGGTCTGAGCAGGACTTCCCGCCAATTCGTGATGAGGCAGCTATCGTTCGTGATGGTTTTGAAGTGTCAGATGATGTGGATTACGCATTTGTAACGAACGCACTGCAAGCGCAGCGCCTAGTTAACATAGAGTTGCGCAGACGTACCGCTGGTGGATTTACTGAGCTTACAATGTCACCTAAAGGCGCCTACTGTCGAGTTGGTCGCGTGGTTGAGATGAATCTACCTCAGTTAAATCTGTCTGGTGAATTTAGGATTACCTCACAAGTTGAAAACAGCGACCTGACGTTCACCATTACCATGCAGCGTGATGATATTGAGATTTATGACGATGCAATTGGTGAGCCTTACTCACCTCCACCATTACTTGATCTTGGAGGTGGTACGTTAGCTAGCCCGTCTGGGTTGCAGTTCGTTTACTCGTACAACGATGCTGTTGGCAATGTCATTCAGGGCGTTTTAACTTGGCAGAATAACTCAGCATCCACCAGTTACTTTAATGTTGTGATCACGAATGACGATGGAGACATCGTTCAGACTGGAGATGCTAAGGGTTACGTGTTTAACGTTAACGCGCTTCCGATCGGTAACTACCTTGGCAAGGTTAGAGCGGTTGATAGTCGCGGTCGAACATCTAGCTATGCGACAACGTCATTCAGCGTTGGTGAGCCAAAGGTTCCAGCATCGTTTCGTGACATCTCGGCGCCAGATGATGGTCAGGTGCATTCACTTTACGCTCGTTCTAACTGGAACATTGCCATTACGCCAAACATCATCGGTGGAACGCCACAAGGCACTGAGTTTGAGTTCTGGCATCTTGCTGATAGCGGTAGCTACATCTCAGGCCACCCGGAATACGATGAAGGCAGTATTAACCTAGCGACTCTCGTTGCGACAGCGTCATCATTAAATAACGGCGGCTTAATTCCAGATAGATGGCAGCACTACTGGGTTCGTTCGGTTAACCCGTATGGCAAATCTGATTTTATCTACCTTCAGACTGGTACTGCGAAAGAGCAGGATCTGGTTACCACGGTAGTTGAACGCTTAAAGGCGATTGAGGTTGAGTCTCAAAACTGGCTTGCAGACCCTGACACCAACTGGAGTGAGTATGGTTACAAGCTATTCTCGGCAGCTACTGGTGTGGTAACAATGCCCGATGGAACTGTGCTTGAGAACCCGGATGGTCTAGCTGTATTTCAGAATATTATCGCTAACGGTCACATCACAGCCAAGACGCTAACTTTTGTTGATGCTGATTCAATCCCGCCAGAGATTGATAATAAAAATGTAAAGGTAGAGCAGGTTATTGCAATCCCCAACGCATCCTCATATACGAACCAGTCAGAAAGTAGCTCAAATGGTGAGATATACATACACGGCAAGGGTGGTGATAAAGACTTCACTATCACGTTTGAGGGTGGCTCGCTAACTATCGACCCTAATCAAGTAAACAACAGTATTGCAGAGTCATACATGATTGGCTGTAGAAAAGATGGGAGCGATGCGTTCGATTCAACTAGGAAGTTTGTGGCGATAACAGGAAATGTATCAGATGGCTTCCTTGCTAAGTATTACCTTGATGGGGCTCAGGCCAAATCAATAACTGACCCGGAAGATTGGGTTGTGTTTGGATGGGCTACCAACAGCTCTGCTGAATTTGTGGAGAGCGTAACAGTTCAATCTAATGCGGTTGAGCTGCTTAATGCGACCGCAACCCCTGTTTACAACGATAACTGGATATACCCAGACCAGAGCAGTATTCAGATCAAATCTAGTAACTACTCTTCGGGATCTAGCGGTTGGGCTATTGATAAGTACGGTAACTCTGAGTTTAATAATATCGTCGCTCGTGGTGATGGGTACTTTAACAACGGATGGTTTAAGGGCACTGTTTACGCTGATAAAATTAGTGGTGACGTTGTGTCTGCGCTAGTTCTATCCGCATCAAGCAAAACTGCGGGTGCTGGTTGGACTACCTTTGATTCGGTCAAGGTTAATGGTTCGTCATCAAAAACCAGAAGGCTGGTGGTTACGGTTGCGCTTAAGGCGTCATCATCAAGAAGTGGTACAGGTAACTCTGGTGCGGTTCAAGCTAAAGGCAGAGTTAGACTTACTGGTTCATTTGGAACTGTATACTCTCAATATCTAGAGACGCCGACAGACTACCACTCAGATCAAGATGGTGGTACAACTAGCGTCATAAACCAGACCGAAGTTACATTAATTGTTACCGTACCTGCTAACACTACGGGAACCGCGACAGTTCAAGTTGATGCCGAATATGGCTCGATTGTCGTATCAGGAACTTCAGGAAACTTATGGATAGCACAACTAATGCCTAACGGCTCAGACTTAGGAAGTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
ceaba266962cbbc38ac87b7583044fce5b03a67d6b10d88b2b2316a7f37dfb0d
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2881
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Rapid evolution of virus immunity in the wild Piel,D., Bruto,M., Labreuche,Y., Blanquart,F., Chenivesse,S., Lepanse,S., James,A., Garcia Cruz,R., Dubert,J., Petton,B., Lieberman,E., Wegner,M.K., Hussain,F.A., Kauffman,K.K., Polz,M.F., Gandon,S., Bikard,D. and Le Roux,F. 2024-02-09 — GenBank