Protein

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Genbank accession
AUS00525.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MTLKVVDPINITEAVLTASDIPEPDASVGEVEWQDPTELDQFGSYSNVQETATGAPNGIVYSFGWSGLISKIDINNKTVSEFSGYSGIIRTSEMALDGCIYFTGDSGIVYKLDPIDDSVVTIGSFSGSCGAMSLAPDGNIYGSGDNGFAIKIDTSLQSVSTFGSHSNQSYKTSSLGGDGNVYCAGIGDVLKINVEEQSVEVFGTYKGRYDGSQTGSDGNIYLVGNTGTVLKIDVGGGDISTFGTYFGRYFSAASTDGDVIKCVGSINATGVSEVIDINITTQEVTRYGSYNINALAITEATGGVMIAVGRDIGANNGVIYIPKAYSPGDRVVLESEHLVYQCLSYTYVNPKDGATDDSVATWIVVGPTNKWAMFDGLQNTKTTSSTDFTVTINPPYNANTLAMLGFSGVESVRIEVDNSLDVNIYDKTYSMSDFSAIYDHYTYVFYQIASLDDFIATDLPPLPNTTIRVTFSGSNMTIGELVTGFAIDIGQLVAENTKSDRFRYREQEYNEFGYPTGEAPIVVELNTYDVLVPKLNNQAIQKLLDTLTGENTLWVGDIGGGQSLVTYGFFERSPIPYSMPNHINYQITVRASV
Physico‐chemical
properties
protein length:593 AA
molecular weight: 63771,98090 Da
isoelectric point:4,20571
aromaticity:0,10455
hydropathy:-0,07808

Domains

Domains [InterPro]
DC_2002
ATT
1–40
DC_2002 SSF101898
DC_1523
STR
60–176
DC_1523 DC_1523
AUS00525.1
1 593
Architecture
ATT
STR
ATT 1-40 | STR 57-593
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AUS00525.1
1 593
Domain Start End Length (AA) Confidence
N-terminal 1 123 123 0,5967
Central domain 124 322 200 0,3235
C-terminal 323 593 270 0,1153
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-123
Central
124-322
C-terminal
323-593

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage 1.276.O._10N.286.54.E4
[NCBI] 		1881277 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio cyclitrophicus
[NCBI] 		47951 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AUS00525.1 [NCBI]
Genbank nucleotide accession
MG592644 [NCBI]
CDS location
range 22936 -> 24717
strand +
CDS
ATGACGTTAAAAGTAGTCGATCCAATTAACATTACGGAGGCGGTGTTAACTGCCTCTGACATACCGGAGCCGGACGCTAGTGTTGGTGAGGTTGAATGGCAGGACCCAACCGAACTTGATCAGTTTGGAAGCTACAGCAATGTGCAGGAAACGGCAACAGGAGCGCCGAACGGGATTGTTTACTCTTTCGGATGGTCTGGATTGATATCAAAAATAGACATCAACAACAAGACAGTTTCTGAGTTTTCTGGATACTCAGGGATAATAAGAACTTCGGAGATGGCGTTGGATGGGTGTATATATTTCACAGGTGATTCAGGAATTGTCTACAAATTAGACCCCATTGATGACTCAGTTGTTACTATTGGTTCATTCTCTGGGTCGTGTGGTGCAATGTCTCTAGCTCCTGATGGGAATATTTATGGGTCTGGCGATAATGGATTTGCCATAAAGATAGACACATCCCTGCAATCTGTTTCTACATTTGGTAGTCACTCGAATCAATCATATAAAACATCATCCCTTGGTGGTGATGGTAATGTGTATTGCGCTGGAATTGGTGACGTATTGAAAATAAATGTAGAGGAGCAATCTGTAGAAGTATTTGGCACATACAAGGGCAGATATGACGGATCGCAAACAGGCTCTGACGGTAATATATACCTAGTTGGTAATACAGGCACAGTTTTGAAGATAGATGTTGGTGGTGGTGATATATCAACATTTGGAACTTACTTTGGTCGGTACTTCTCCGCAGCGTCAACGGACGGTGACGTAATAAAGTGCGTTGGTTCGATTAACGCAACTGGAGTATCAGAGGTTATAGATATAAACATAACAACTCAGGAGGTTACGCGATACGGTTCTTATAATATAAATGCACTAGCCATAACAGAAGCCACTGGCGGCGTGATGATTGCTGTTGGTAGGGATATAGGGGCTAATAATGGTGTAATATACATACCAAAGGCTTACTCTCCAGGTGATAGGGTTGTCCTTGAGTCTGAGCACTTAGTTTACCAGTGCCTATCTTACACATATGTAAACCCAAAAGACGGCGCGACAGATGACTCAGTAGCAACTTGGATTGTGGTTGGACCAACAAATAAATGGGCTATGTTTGATGGATTGCAAAATACAAAAACAACCAGCTCAACTGATTTTACGGTAACGATAAATCCACCTTACAACGCAAACACATTAGCGATGCTTGGCTTTAGTGGTGTGGAATCGGTAAGAATAGAGGTCGATAATAGTCTTGATGTAAATATTTACGATAAAACATATTCAATGTCTGACTTCTCAGCAATTTACGACCATTACACCTACGTGTTTTATCAGATTGCGAGTCTAGACGACTTCATAGCTACCGATTTACCACCACTGCCAAATACGACAATCAGAGTTACATTCTCAGGCTCGAACATGACAATAGGCGAGTTAGTGACTGGATTTGCAATTGATATAGGTCAGCTGGTCGCTGAAAATACCAAGTCAGACAGGTTTAGATACAGAGAACAGGAATACAACGAATTCGGATATCCGACTGGAGAAGCTCCGATAGTTGTAGAGCTAAATACATACGATGTGCTAGTGCCAAAGCTTAACAACCAAGCAATCCAAAAGCTACTAGATACATTAACCGGAGAGAATACCCTCTGGGTTGGTGATATCGGCGGCGGTCAGAGTTTAGTTACATACGGATTCTTTGAGCGTAGCCCTATTCCATACTCAATGCCAAATCACATTAACTATCAAATCACTGTACGCGCATCTGTGTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
53c66316bb46404aefdca0c99647c46320d4e7538a77930efa7912927d9cfdef
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8516
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A major lineage of nontailed dsDNA viruses as unrecognized killers of marine bacteria Kauffman,K.M., Hussain,F.A., Yang,J., Arevalo,P., Brown,J.M., Chang,W.K., VanInsberghe,D., Elsherbini,J., Cutler,M.B., Kelly,L. and Polz,M.F. 2018-01-24 — GenBank