Protein

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UniProt accession
R9S7J4 [UniProt]
Protein name
Phage tail collar domain-containing protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,91
Protein sequence
MSKRYLSGRVKRLPQDQLKDDRYKYLGLEQAEPNLADPITSPAVPSGQQYQLVAIPGFEGKRYWVPVGGGLIPGAISVYDEGTLVSAASSVTQLNFVGAAVTAQVDVQNPSGHPGIAATITVVPVTIGSNPPVSPIHGELWWEDDIGDLCIYYDDGDTSQWVTVVASGNGGGPTGPAGPPGPTGITGPSGPPGPSGPGGGPGPAGPQGDAGPSGGPGPTGPAGPPGPAGGPPGPQGPQGDAGPTGPTGPPGTGSPGPAGPPGPSGGPGPTGPAGPTGPDGPTGPTGPAGGPPGPPGPSGPPGPSGGDGPAGPSGSPGPPGPSGGPPGPSGGPGPAGPPGPDGPSGPPGPAGSAGAIPAGVVVMWSGAQNAIPSGWVLCDGNNSSPDLRDKFVIGAGSNYAVDNTGGSADAVVVDHSHSASTSVSGAGAHTHSFSASDSHTHSFSGSGSDTFSGSGSHTHSFSGSGSHGHSLSLSDSAHQHTSAIPAQNQVAGNSGSQTIWGSVTNSPTWGATANVSGSADSASVSISGTTGSGTASISGSVSISISGTTGSGTASISGTTGSGGSGVSGSTTISSTGVTGTNKNLPPYYALCYIMKS
Physico‐chemical
properties
protein length:597 AA
molecular weight: 56341,17220 Da
isoelectric point:4,80837
aromaticity:0,04523
hydropathy:-0,34472

Domains

Domains [InterPro]
DC_0835
STR
16–199
DC_0835 DC_0620 DC_0085
IPR050149
Unmapped
172–447
IPR050149 SSF88874
SSF88874
STR
355–485
SSF88874
cd22641
STR
356–440
cd22641
R9S7J4
1 597
Architecture
STR
STR
STR
STR 16-199 | STR 226-294 | STR 330-597
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Prochlorococcus phage P-SSM5
[NCBI] 		536454 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Genome Context

Genome Context

Gene Ontology

Description Category Evidence (source)
GO:0031012 extracellular matrix Cellular Component IEA:TreeGrafter (UniProt)
GO:0005615 extracellular space Cellular Component IEA:TreeGrafter (UniProt)
GO:0030020 extracellular matrix structural constituent conferring tensile strength Molecular Function IEA:TreeGrafter (UniProt)
GO:0030198 extracellular matrix organization Biological Process IEA:TreeGrafter (UniProt)

Tertiary structure

PDB ID
a68410849998ae1e60d3717f9894c7b3257b792431bcfc14a3f1c22ff585cbc2
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,4994
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50