Protein

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Genbank accession
XYM57061.1 [GenBank]
Protein name
short tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,59
Protein sequence
MTYSYSANPLYVADGQSVQFRYEAPAGFDTIEQVRIDIGELTVFWIIETKLEDFAPDPFGFQNVDPADQDELYTYAATADPDDGVAYTGAQGDPPALRAGEQVVTITGLDSTTQAPIQITSNVLDQVNDWAFRLRVYNGSGYNAWGSWLTSSNNLTVSNNDQIQLRVRSSTAAVTPHTVNVVVGSGSAEWRVTTGQIPVNTPFPAPDFGVYNDAPLNFQYVYSDIVQINGLTTTATISVPTNVEAAVSNFNTTFTNPQGDAVFNNILSGWGDNLTVANGQYVQLRAETGGVGNFTQDYGITIGDTANNGSWRVITGDDIDELPDTFTFQDLVNQPPGGTNYLSTVQAGSAANNNTEALVAGLTDGITVPVTLRQSETTATNPRIIINDSSPGQFGNLTVQNGDRIRLVMDGSTSINDPINGFNGSVKMAISVGDRDISPWTITNWAAPDTTPSFTPITEVLNRTPGGSSVIGPIGLTDFNQPITISATAPLAFNEFGFATGENVGDVLFSVNGAAAVSATQTGGVTVQPDYTGDPVLITIIVQQPGDADVEPVIGLSHQTRTTITFGDAASFNLRSVNYAVKPIPPAYLGVWYTEKNASFDEAGWIAAGEDPNDAADYYRQPKFDGYSIGTVIPVPKETVVDDGNYGYGTLAERYPGFLECNGQSVAAADYPWLFDAIGTQYGGTATYVSATKTYSGNFNLPDYRGVRMVGRGIVDANRGSSAFVPVTSAGGSYELPGSTGGWWYVDDVDVAGANPLEQVIAPAGQTTGVDSEYFSLGTPRTSGTDELTADVDFNITGFVTGTMNDITSVPVRVPSHEHAFVTSETADPDGDPVIPWGVPAYYKTGRQGVTSDTNDANNRPDDESDALDDGYWENISLDGFDYTEFDQEVGDTGGFNGAEDFLPNSGTVTVSFGNYWGSPASQLNSQLEGSTSDHFEPGTQNTTDAGVIDTTEGRGRIQNYQNSGATLTHSHLLGLDPVLDPTQDFSYGNVNATASAYRNGLATFGNTCQITFNQAEVGLELNSATFSWNNATKPIPQAKMDPQRKVPIVTPFHKMKYIIKAY
Physico‐chemical
properties
protein length:1063 AA
molecular weight: 113496,51690 Da
isoelectric point:4,06543
aromaticity:0,10160
hydropathy:-0,28890

Domains

Domains [InterPro]
DC_0346
STR
1–1047
DC_0346
IPR037053
ATT
623–705
IPR037053
SSF88874
STR
656–735
SSF88874
IPR011083
ATT
656–706
IPR011083
XYM57061.1
1 1063
Architecture
STR
ATT
STR
STR 1-622 | ATT 623-706 | STR 707-1047 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XYM57061.1
1 1063
Domain Start End Length (AA) Confidence
N-terminal 1 64 64 0,9880
Central domain 65 587 524 0,1467
C-terminal 588 1063 475 0,6476
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-64
Central
65-587
C-terminal
588-1063

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage Sf-CH11
[NCBI] 		3413211 Viruses >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XYM57061.1 [NCBI]
Genbank nucleotide accession
PV340848.1 [NCBI]
CDS location
range 42739 -> 45930
strand +
CDS
ATGACCTATTCGTATAGTGCCAATCCGTTATATGTTGCTGATGGTCAATCAGTCCAGTTTAGGTATGAAGCACCTGCTGGATTTGATACCATTGAGCAGGTACGCATTGACATTGGCGAACTTACTGTCTTCTGGATTATTGAGACGAAGTTAGAAGACTTTGCTCCTGACCCATTCGGTTTTCAAAATGTAGATCCTGCTGATCAGGACGAACTATACACATATGCGGCAACTGCAGATCCTGATGATGGTGTTGCATATACAGGAGCACAAGGTGATCCTCCTGCATTAAGAGCAGGAGAGCAAGTTGTAACTATTACTGGTCTAGACTCTACTACTCAAGCACCTATTCAGATTACATCTAATGTTCTCGATCAAGTAAATGATTGGGCATTTAGACTTAGAGTTTATAATGGATCTGGTTACAATGCTTGGGGTTCTTGGCTTACTAGTAGCAACAATTTAACAGTATCAAATAACGATCAGATTCAGTTAAGGGTACGATCTTCTACAGCAGCGGTTACTCCTCATACTGTTAATGTAGTTGTTGGTAGTGGTAGTGCCGAGTGGCGTGTAACTACTGGTCAAATTCCAGTCAACACACCATTCCCCGCACCTGACTTTGGTGTATATAATGACGCACCATTGAATTTTCAATATGTGTATAGTGATATTGTTCAAATCAATGGTTTGACTACTACTGCTACCATTAGTGTTCCTACTAATGTAGAAGCTGCTGTTTCTAATTTTAATACCACATTTACTAATCCTCAAGGTGATGCTGTATTCAACAACATCCTTAGTGGATGGGGAGATAATCTTACAGTTGCCAATGGTCAGTATGTTCAGTTAAGAGCAGAGACAGGTGGTGTTGGAAACTTTACACAGGACTATGGTATTACAATTGGAGATACTGCTAATAATGGATCTTGGAGAGTAATTACTGGTGATGATATTGATGAATTGCCAGATACATTTACCTTCCAAGATTTGGTTAACCAACCACCAGGAGGAACAAACTACCTATCTACAGTTCAAGCAGGTTCTGCCGCTAACAATAACACAGAGGCATTAGTTGCTGGTCTTACTGATGGTATTACAGTTCCTGTTACCTTGAGACAATCAGAAACAACTGCTACAAATCCTAGAATTATTATTAATGATAGTTCTCCTGGTCAGTTTGGTAATCTAACTGTACAAAATGGTGATAGAATCCGTTTAGTTATGGATGGATCTACCTCTATCAACGATCCAATCAATGGATTTAATGGTAGTGTTAAGATGGCGATTAGTGTTGGTGATAGAGATATTTCTCCATGGACAATTACTAACTGGGCAGCACCTGATACTACACCATCTTTCACACCTATCACGGAAGTATTAAACAGAACTCCTGGTGGATCTAGTGTTATTGGACCCATTGGATTGACAGACTTTAATCAACCAATTACAATTAGTGCTACTGCACCATTAGCATTTAATGAGTTTGGATTTGCTACAGGAGAAAATGTAGGAGATGTTCTATTCTCTGTCAATGGAGCAGCTGCTGTATCTGCAACTCAAACTGGTGGCGTTACAGTTCAACCAGATTACACTGGAGATCCAGTTCTTATTACAATTATTGTACAACAACCTGGAGATGCTGATGTAGAACCTGTTATTGGATTGTCTCACCAAACTAGAACTACTATTACATTTGGTGATGCTGCTAGTTTTAACTTAAGATCTGTTAATTATGCTGTTAAACCAATTCCCCCAGCATACCTCGGAGTATGGTATACTGAGAAGAATGCTTCCTTCGATGAGGCAGGTTGGATAGCAGCAGGAGAAGATCCAAATGATGCTGCAGACTACTATAGACAACCTAAGTTTGATGGTTATTCAATTGGTACAGTTATCCCTGTTCCAAAAGAAACTGTTGTAGATGATGGTAATTATGGATATGGCACCCTAGCAGAAAGATATCCTGGATTTTTGGAGTGTAATGGTCAATCAGTAGCAGCAGCAGATTATCCTTGGTTGTTTGATGCAATCGGCACCCAATATGGTGGTACTGCAACATATGTTTCAGCAACCAAAACATATTCAGGAAACTTTAATCTTCCAGACTATCGTGGTGTTAGAATGGTTGGTAGAGGTATCGTTGATGCCAACAGAGGATCATCGGCATTTGTTCCTGTAACTAGTGCTGGTGGATCTTATGAACTTCCTGGTTCTACTGGTGGATGGTGGTATGTTGATGATGTTGATGTTGCTGGTGCTAATCCACTAGAGCAAGTTATTGCTCCTGCTGGACAAACTACAGGTGTAGATTCTGAGTATTTCTCTCTTGGAACTCCTAGAACATCAGGAACTGATGAACTAACTGCTGATGTTGACTTTAACATCACTGGTTTTGTGACGGGAACAATGAACGATATTACATCTGTTCCTGTTCGTGTACCATCACACGAACACGCTTTCGTTACATCTGAAACTGCAGATCCTGATGGTGATCCAGTTATTCCATGGGGTGTTCCTGCATACTATAAAACTGGTCGTCAGGGTGTTACTTCAGATACAAATGATGCAAACAATCGTCCTGATGATGAATCGGATGCATTGGATGATGGATACTGGGAGAATATCAGTCTTGATGGTTTCGATTACACCGAATTTGACCAAGAAGTTGGTGATACTGGGGGATTCAATGGTGCTGAGGACTTCTTGCCTAATAGTGGTACTGTTACAGTATCATTCGGAAACTATTGGGGATCCCCTGCATCTCAGTTGAACTCTCAACTTGAGGGTTCTACATCAGATCACTTTGAACCTGGAACTCAGAATACTACTGATGCTGGTGTTATTGATACAACAGAGGGTAGAGGTAGAATCCAAAACTATCAAAACTCTGGTGCTACTTTGACACACTCTCACCTGCTAGGTCTTGATCCAGTTCTTGATCCAACACAGGATTTCTCCTATGGTAATGTTAATGCAACAGCATCTGCATATAGAAATGGATTGGCAACTTTTGGTAATACATGTCAGATAACATTTAACCAAGCAGAAGTTGGACTAGAATTGAACTCTGCAACGTTCTCCTGGAACAATGCTACCAAACCCATTCCTCAAGCAAAGATGGATCCACAAAGGAAGGTTCCCATCGTAACCCCCTTCCACAAAATGAAATATATAATTAAAGCATACTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
8762c3b26a2c7d41dda3eebfc53b0ea365dcea1d418ad329c250a468c303c975
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,7028
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50