Protein

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Genbank accession
WYW04185.1 [GenBank]
Protein name
tail protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MTKVTGSYESLIRGVSEQVAHQRYPGQHWVQDNMISDPVRGLVRRWGSVMKHEQATSALPTAATAQDVQDFRETSLYLGDVEYSFMHRRKQVIAGSTASGIVVVDKTNKRILPVSIGSGDAVAQSILQTGISSITSAGRFVLLASATKPVDYTEVNTWQTDRTGVCFITVGNYSRTYSVTASHVNGQTYTASYTTPSSYYPGTLDTSDISASATDYVKQVNDRVYAYQTAVNQWIGTSAAAIVPSAVVVQLVLALRNAGFPAADVNSIENHMVFGNVLTGLSITDGANNSTVGAVFQEVEAVTDLSVRHRAGKVIRISPKITSGGSGTSYYVKARQISASDNSGWPKVIWEEAAGIKVTPGFVCMLGCIQGGTFYLASSAAILQSISGVSAPEWVPSSSGDYDSQQQLAMFGKTINYMRLFQDRLMVIAGSTVLLSKTGDYFNFFRASALQIANDDPIEMYALGSDDDVITDGALLDRDLLLFGNVWQYVISGREALSPQSPYISIQSSYTDSNHCSPVSAGNLVFYTQPRDHKLTVQQMQTGAYAGTVATFEVTQQLSKYLQGSPTALVATTSPSAVFVRTTGLTNGVYVFSYLDAPGQTERLFDSWSRWTWNEALGPTVGITGKDGALLTVTLRSGIGSNLYVLDEFTLAGTLSDTPYLDSQRPGQAPGGMAVGTPIAASLSAAMNGDAGDFFLIGRPFSDIALLEAEFPTLIGSIVIGANYDSLVTVTNPYMRDNDGKPILDGRLTVGNFNVTTVDSAAMKVEVQDLQTLGMETTEVLNWVARPAGSWVLNKQQVMETATMAAGVYKETRNCKVTFRSRSWLPFGLSTMEWTGQFFTRRT
Physico‐chemical
properties
protein length:843 AA
molecular weight: 90954,25300 Da
isoelectric point:5,37784
aromaticity:0,09371
hydropathy:-0,04389

Domains

Domains [InterPro]
IPR058003
TTP
1–615
IPR058003 IPR058003
DC_0058
STR
1–843
DC_0058
WYW04185.1
1 843
Architecture
STR
STR 1-843
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WYW04185.1
1 843
Domain Start End Length (AA) Confidence
N-terminal 1 196 196 0,9152
Central domain 197 395 200 0,1803
C-terminal 396 843 447 0,2412
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-196
Central
197-395
C-terminal
396-843

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage vB_PpuP-IPa-2
[NCBI] 		3132677 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudomonas putida KT2440 and
[NCBI] 		1481724 Heterolobosea > Eutetramitea > Lyromonadida > Psalteriomonadidae > Monopylocystis >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WYW04185.1 [NCBI]
Genbank nucleotide accession
PP496473 [NCBI]
CDS location
range 24638 -> 27169
strand +
CDS
ATGACCAAAGTTACGGGCAGCTATGAGTCCTTGATCCGTGGCGTGTCCGAACAGGTCGCGCATCAGCGGTATCCCGGCCAACACTGGGTGCAGGACAATATGATTTCGGACCCGGTGCGCGGCCTTGTGCGGCGCTGGGGTTCGGTCATGAAACACGAGCAGGCTACGTCGGCGCTGCCTACCGCTGCAACGGCGCAGGATGTTCAGGACTTCCGCGAGACCTCGCTGTACCTCGGCGACGTTGAGTACAGCTTCATGCACCGCCGTAAGCAGGTGATCGCAGGCAGCACCGCCAGCGGCATCGTCGTGGTGGACAAGACCAACAAGCGCATCTTGCCGGTGAGCATCGGCAGCGGTGACGCCGTGGCGCAGAGCATCCTGCAAACGGGCATCAGCAGCATCACGAGTGCTGGGCGGTTCGTACTGCTGGCGTCAGCAACCAAACCAGTGGACTACACAGAAGTCAACACTTGGCAAACTGACCGCACGGGCGTGTGCTTCATCACCGTGGGCAACTACTCCCGGACGTACAGTGTCACAGCCAGCCACGTAAACGGGCAGACGTACACAGCCTCGTACACCACGCCGTCAAGCTACTACCCCGGAACGTTGGACACAAGCGACATCAGCGCATCTGCGACGGACTACGTGAAGCAGGTCAACGACCGAGTGTACGCCTACCAGACCGCTGTAAACCAGTGGATCGGTACGTCTGCGGCTGCAATCGTCCCGTCTGCCGTCGTGGTGCAGCTAGTTCTGGCGCTGCGCAATGCGGGCTTCCCGGCAGCCGATGTGAACAGCATCGAGAACCACATGGTATTCGGAAACGTGCTGACTGGCCTGAGCATCACAGACGGTGCGAACAACAGCACAGTGGGCGCGGTGTTTCAGGAGGTCGAAGCAGTTACGGACCTCAGCGTCAGGCACAGGGCCGGTAAGGTGATCCGAATCAGTCCCAAGATCACGAGCGGCGGCAGTGGCACTTCGTACTACGTCAAGGCTCGTCAGATCAGCGCGTCGGACAACAGCGGGTGGCCCAAGGTCATTTGGGAGGAAGCAGCAGGCATCAAGGTGACGCCGGGCTTCGTGTGCATGCTGGGCTGCATTCAGGGCGGAACGTTCTACCTCGCAAGCAGCGCAGCTATCCTGCAAAGCATCAGCGGAGTGAGCGCACCTGAGTGGGTTCCGAGTTCGTCCGGTGACTACGACAGCCAGCAACAACTGGCGATGTTCGGCAAGACGATCAACTACATGCGGCTGTTCCAAGACCGCCTGATGGTGATCGCAGGCTCCACGGTTCTGCTGTCCAAGACCGGTGACTACTTCAACTTCTTCCGGGCATCCGCGTTGCAGATTGCGAACGACGACCCGATTGAAATGTACGCACTGGGTTCTGACGACGACGTTATCACTGACGGCGCGTTGCTTGACCGGGACTTGCTCCTGTTCGGGAACGTGTGGCAGTACGTCATTAGTGGCCGGGAAGCGCTGTCGCCGCAGTCGCCGTATATCAGCATTCAGTCCAGCTACACGGACAGTAACCACTGCTCCCCGGTGAGCGCGGGTAACTTGGTGTTCTACACTCAGCCACGAGACCACAAGCTGACAGTGCAGCAGATGCAGACCGGCGCGTACGCTGGCACCGTTGCGACCTTCGAGGTGACGCAGCAGCTCAGCAAGTACCTGCAAGGCAGCCCGACTGCGCTGGTGGCAACGACCTCTCCATCGGCGGTGTTCGTCCGCACGACTGGACTAACCAACGGCGTGTACGTGTTCAGCTACTTGGACGCACCGGGCCAAACGGAACGGCTGTTCGATAGCTGGAGCCGGTGGACTTGGAACGAAGCGCTCGGCCCAACTGTCGGGATCACCGGCAAGGACGGCGCGTTGCTGACAGTGACCCTGCGCAGCGGCATCGGTTCCAACCTGTACGTGCTGGACGAGTTCACGCTTGCGGGTACGCTGAGCGACACGCCGTATCTGGACAGCCAGCGTCCCGGACAGGCGCCGGGCGGTATGGCCGTGGGCACACCGATTGCTGCCAGCCTGAGCGCTGCAATGAACGGTGACGCGGGAGACTTCTTCCTGATCGGTCGCCCGTTCTCCGACATCGCGTTGCTGGAGGCAGAGTTCCCGACCCTTATCGGTTCCATCGTAATCGGCGCGAACTACGACAGCCTCGTCACCGTCACCAACCCGTACATGCGGGACAACGACGGCAAGCCGATTCTGGACGGACGGTTGACTGTGGGCAACTTCAACGTGACCACTGTTGACAGCGCGGCCATGAAGGTTGAGGTGCAGGACTTGCAGACGCTGGGCATGGAAACCACCGAGGTTCTTAACTGGGTGGCTCGGCCAGCAGGCTCGTGGGTACTCAACAAGCAGCAGGTCATGGAGACTGCAACGATGGCTGCGGGCGTGTACAAAGAGACACGTAACTGTAAGGTAACGTTCCGCTCTCGCTCGTGGCTTCCATTTGGATTGTCCACCATGGAATGGACTGGACAGTTCTTCACTCGGAGGACTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
075905695b17a042335d958d2a9d0e2c268a554275861811ab50cae821c70bc5
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2895
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation and characterization of a phage collection against Pseudomonas putida Brauer,A., Rosendahl,S., Kangsep,A., Rikberg,R., Lewanczyk,A.C., Horak,R. and Tamman,H. — — GenBank