Protein

View in Explore
Genbank accession
QBP05805.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MSLQKMSVGTTGLIPASDAYASNLIVAHSGAIEHGYSNVASLINTSGSNFPKFVPRASNQPLFSSTAKFYNTALELSSRSPGVTGWFGFENPNIPAFGTNNFCLETWVYIPTFTGLTQASLWFMTNGVDNTGFQCFLTGDSFGDPAARRGVYFVGGAGAELNYAGACLSPNTWHHIAVVRNGSASNSLKIYVDGVDNTDFRNATGNPNWTYSSTLYLAAPASETGWDAMKLQDYRIYQGTPKYTSNFTPPGAMFF
Physico‐chemical
properties
protein length:255 AA
molecular weight: 27487,26230 Da
isoelectric point:6,04087
aromaticity:0,14118
hydropathy:-0,13216

Domains

Domains [InterPro]
G3DSA:2.60.120.200
STR
37–241
G3DSA:2.60.120.200
IPR013320
STR
91–237
IPR013320
PF13385
LEC
93–239
PF13385
QBP05805.1
1 255
Architecture
STR
STR 37-241 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage S-B28
[NCBI] 		2545435 Uroviricota > Caudoviricetes > Autographivirales > Qadamvirus > Qadamvirus SB28
Host Synechococcus sp.
[NCBI] 		1131 cellular organisms > Bacteria > Bacillati > Cyanobacteriota/Melainabacteria group > Cyanobacteriota > Cyanophyceae

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QBP05805.1 [NCBI]
Genbank nucleotide accession
MK016662.1 [NCBI]
CDS location
range 5786 -> 6553
strand -
CDS
ATGAGTTTACAGAAAATGTCGGTAGGCACAACTGGCTTAATTCCAGCTTCGGATGCCTACGCTTCCAATTTAATTGTCGCCCATAGTGGAGCTATTGAGCATGGTTATTCCAATGTAGCCAGTCTCATCAATACTAGCGGTTCTAATTTTCCTAAGTTTGTACCTAGAGCAAGTAATCAACCACTTTTTTCTTCAACAGCTAAGTTCTACAACACTGCTCTTGAATTAAGCTCAAGGAGTCCAGGTGTTACGGGATGGTTTGGCTTTGAGAATCCTAATATACCAGCCTTTGGAACAAATAATTTCTGTTTGGAGACTTGGGTCTATATCCCAACATTCACTGGATTGACTCAAGCTTCTTTATGGTTTATGACAAACGGAGTAGATAACACTGGATTTCAATGTTTTTTAACTGGTGATAGTTTTGGCGATCCTGCAGCTAGGCGTGGTGTTTATTTTGTAGGTGGAGCAGGGGCAGAACTTAATTATGCTGGGGCATGTCTTTCACCTAATACCTGGCATCACATTGCTGTTGTACGCAATGGCTCCGCATCCAACTCCTTAAAAATCTATGTTGATGGTGTTGATAACACTGATTTTAGAAATGCCACAGGTAATCCGAATTGGACATATTCATCCACTCTTTACCTAGCAGCTCCAGCAAGCGAAACAGGATGGGATGCAATGAAACTTCAAGACTATCGAATCTACCAAGGTACCCCTAAATACACCAGCAACTTCACGCCTCCTGGGGCGATGTTCTTCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
e604a6c5615c9860d9020e991b7d0465369d4b71c5fa0595402ca0f5e542db47
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,6122
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation and Genetic Analysis of a Novel Cyanophage S-LB68 from the Huang Bohai Liu,X. 2020-10 — GenBank