Protein

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Genbank accession
AUR92880.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MSCEDYPTAQTAKTFKLDAETVNEVVTLEQDRTSEAGDGKTKKTLWGIENDATNQRDEFEQLASDQRDNFEVSFGSQFNFKRIGNISDYAGQSLPETEKLNSYQYPDDSGDWYVPEQGQSFPITIPADPTAAGSDWYLQSPSGVYRGLWPDTGGSADKGDTYQTQVGGTPTGQYFTALQNTTADPVGDDVNWRVVISIDSLSQYTDIVYKASGGKSAIENMIEDFALNPLMRNIGTVIKTGGTTWVYEDSTGPITHLNFRAFDAVNVMDCGAKGDGTPCADAFIYATTLRCNTIYVPDGGIFQIEKEVDLKFKNLVGGGGISQSTTANGISEISHPVGYTGVMFSYPGGTIRDIYFRGNGATATCFNRIGYNQRFQDCTFRVFSRALHSIGGTAGATVNFYVDRCNFYSNSRCFWSEDVNSNDSTTTHISNCEFNNNDECIIFDKNAYGCSFTNLIFEYCNVALSAKAFASCHFDTLWYEYTLDGTDRDIVITNNQLFQRNKVDNIYIHPSSTWNNNISSDGTSAGGVFADRDTLRVGGFQGDRVKIQDRYFQDDFNSAFGGTTNRQFGIKGSDQHPISGLSTTVRVDHGTGGRVVFGHTDESRTTETIHRRATGPNSAGDGAYLALDKWDANEERSWEAYDPDATGDVGKFRALQYLVYNGSTVNAGGYILAKTSTGAFSLTRENGGIPSFSNPALSISGIEVSSGFLVHKVIIGGTTIQIFFADLSGTLTDPDRFTLGFQNT
Physico‐chemical
properties
protein length:744 AA
molecular weight: 81408,22640 Da
isoelectric point:4,66071
aromaticity:0,11694
hydropathy:-0,43212

Domains

Domains [InterPro]
DC_0489
STR
1–146
DC_0489 IPR011050
DC_1322
ATT
134–285
DC_1322 DC_0160
IPR012334
STR
264–608
IPR012334
AUR92880.1
1 744
Architecture
STR
ATT
STR
STR 1-133 | ATT 134-285 | STR 286-744
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AUR92880.1
1 744
Domain Start End Length (AA) Confidence
N-terminal 1 279 279 0,9962
Central domain 280 549 271 0,9729
C-terminal 550 744 194 0,9455
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-279
Central
280-549
C-terminal
550-744

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage 1.178.O._10N.286.45.E12
[NCBI] 		1881253 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio cyclitrophicus
[NCBI] 		47951 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AUR92880.1 [NCBI]
Genbank nucleotide accession
MG592545.1 [NCBI]
CDS location
range 22365 -> 24599
strand +
CDS
ATGAGCTGTGAAGATTACCCAACCGCACAAACAGCAAAGACGTTTAAGCTTGATGCTGAGACTGTAAATGAAGTTGTCACGCTAGAGCAAGATAGGACAAGCGAGGCTGGTGACGGAAAGACTAAGAAAACCCTATGGGGAATTGAGAACGATGCGACAAATCAGCGTGATGAGTTTGAGCAGTTAGCATCTGACCAGCGTGATAATTTTGAGGTTAGTTTTGGCTCTCAATTCAATTTTAAACGAATTGGTAATATTTCAGATTACGCAGGGCAATCACTGCCGGAGACTGAAAAACTTAACTCGTATCAATACCCTGACGACTCTGGCGACTGGTACGTGCCGGAGCAGGGCCAATCATTCCCAATTACAATACCAGCCGACCCTACAGCAGCCGGTAGCGATTGGTATCTTCAGTCGCCTTCTGGAGTTTATCGCGGATTATGGCCGGACACGGGCGGCAGTGCTGATAAGGGTGATACGTATCAAACCCAGGTAGGTGGCACACCTACAGGTCAATACTTTACAGCACTACAAAACACAACGGCCGATCCGGTTGGGGATGATGTGAACTGGCGGGTGGTTATCAGTATTGATAGTTTATCACAATACACCGATATAGTTTACAAGGCATCTGGCGGTAAATCTGCTATTGAGAATATGATTGAGGATTTTGCGTTAAATCCTCTAATGCGCAACATTGGCACTGTAATCAAAACTGGCGGTACAACTTGGGTGTATGAAGACTCTACCGGTCCAATTACTCATTTAAACTTTAGGGCATTTGATGCGGTCAATGTAATGGACTGTGGAGCTAAGGGGGATGGTACACCGTGTGCTGATGCGTTCATTTATGCCACGACATTGCGATGCAACACCATATATGTGCCTGACGGTGGTATTTTTCAGATCGAGAAAGAGGTAGATCTTAAATTTAAAAATCTAGTTGGTGGAGGTGGCATATCGCAATCGACAACAGCGAATGGAATATCTGAAATATCACACCCTGTAGGATATACGGGAGTTATGTTCTCTTATCCTGGCGGAACAATTCGAGATATTTATTTTAGAGGTAACGGAGCTACTGCAACGTGCTTTAATCGAATAGGGTACAACCAGAGATTTCAAGATTGTACATTTAGGGTTTTTAGCAGGGCGCTGCACTCAATAGGTGGTACAGCAGGTGCGACGGTGAACTTTTATGTTGATCGATGCAACTTCTACTCTAATAGTCGCTGTTTTTGGTCAGAGGATGTTAATAGCAATGATAGTACTACAACTCACATTTCTAACTGTGAGTTTAACAATAATGACGAGTGCATTATCTTTGACAAGAATGCGTACGGATGTTCATTTACCAACCTAATATTTGAATATTGTAATGTGGCGCTTAGCGCTAAAGCCTTCGCATCTTGTCACTTTGACACTCTTTGGTATGAGTACACTCTCGACGGAACCGATCGAGATATTGTGATAACTAACAATCAGTTATTCCAAAGAAACAAAGTTGATAATATTTACATCCACCCGTCTTCAACTTGGAATAACAACATATCATCAGACGGAACCTCCGCAGGTGGTGTGTTTGCTGATAGAGATACTCTTCGTGTCGGTGGATTTCAAGGGGACAGAGTAAAAATACAAGACCGATACTTTCAAGACGATTTTAATTCTGCTTTTGGCGGAACTACAAATCGACAGTTTGGCATTAAAGGGTCGGACCAGCACCCAATCTCAGGACTTAGCACCACGGTCAGGGTCGACCACGGCACAGGGGGTAGAGTTGTATTTGGACACACTGATGAATCGCGGACTACAGAAACTATACACCGAAGAGCGACAGGCCCAAACTCTGCAGGTGATGGGGCTTATTTGGCTCTTGATAAATGGGACGCAAACGAAGAAAGGTCGTGGGAGGCTTACGATCCAGATGCGACCGGAGATGTCGGAAAGTTTAGGGCGCTTCAGTACCTAGTTTATAACGGGTCAACTGTCAATGCGGGGGGTTATATTCTAGCTAAAACATCAACAGGCGCTTTCTCGTTAACAAGAGAAAATGGTGGTATACCTAGCTTTTCAAACCCTGCGTTGTCAATATCTGGCATAGAAGTGTCTAGCGGCTTCTTGGTGCATAAAGTGATTATAGGTGGAACAACAATACAAATATTCTTCGCTGATCTATCTGGGACTTTAACAGACCCTGATAGATTTACGCTGGGGTTTCAAAACACCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
9b12bb0cac14e3716491348f9dac70d1750375509e29472e768e58dda0b324f2
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6548
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A major lineage of nontailed dsDNA viruses as unrecognized killers of marine bacteria Kauffman,K.M., Hussain,F.A., Yang,J., Arevalo,P., Brown,J.M., Chang,W.K., VanInsberghe,D., Elsherbini,J., Cutler,M.B., Kelly,L. and Polz,M.F. 2018-01-24 — GenBank