Protein
View in Explore- Genbank accession
- YP_009592991.1 [GenBank]
- Protein name
- long tail fiber protein distal subunit
- RBP type
-
TSPTSPTF
- Protein sequence
-
MATLKQIQFKRSKVAGVNPTAAQLAEGELAINLKDRTLFTKDDLGNIISLGFAKGGDINGNVTQNGDYLQNGTYNLNGNQFVYAGKYIEFLPKTAGNGAWANQHTNKAPIFTDLSSTTSTSEYHPLIKQRYKDGTFSVGTLVSEGSFRVHYIDSTAPDNSKHWVFNRNGNFIVDSGSIEVRAGNISASGNINSANGIVSAPQVNTKTIVLDTKAFGQYDSQSLVQYVYPGTGEENGINYLRKVRAKSGGTIYHEIASAQTGKNDEISWWTGNTLTTKLMGLRNDGAMVLRRSLAIGTITTDENTNNYGSPTPMGERYIALGDAATGLKYIKQGVYDLVGNWNSVASITPDSFRSTRKGIFGRSEDQGTTWIMPGTNAALLSVQTQADNNNAGDGQTHIGYNAGGKMNHYFRGTGQMNINTQQGMEINPGILKLVTGSNNVMFYADGGITSVKQLSIYNGIYLAANNSTAGLTFAPTTTIDGTKQILWEGGTRAGQNKSYVTVKAWGNSFNASGDRNRETVFEVADGQGYYFYSQRVAPTGSETVGPVVTQINGQLNARGSIITDGSLRVNGLSTLSGQVTMDNGLVLSGGGSITGQVKIGNTADAFRIYNAEYGAIFRRSEASLHIIPTLKDAGENGGISNLRPLSVSLNNGMVQMRHSVTLGDDGAGGNMVTVDNDNKLVVITSHSRISPNYRMQLGQSAYIDAECTDTARPAGAGSFASQNNENVRAPFYMNIDRTDTSTYVPIVKQRYVQNNSCYSIGTLINGGNFRVHYHEGGDGVSTGAIIKDLGWEFNKNGDFYSPGKLGAGNVRIGTDGNITGGSGNFANLNTTINNLKTDIVSSYPIGAPIPWPTDTPPEGYAIMEGQTFDTGLYPKLAAVYPSGTLPDMRGQTIKGKPSGRDVLSTEADGIKSHNHSASASNTDLGTKTTSSFDYGTKTSSSFDYGTKTSNTTGNHNHTVSGTTSAAGNHQHARSGPQIQAGIPNNIFYDGYNSVGANANAKFTGTVNGATAGSNIAKTSSEGNHTHSWSGTTSTTGNHAHTVGIGAHTHSVGIGAHSHTVAIGSHGHTITVNATGNTENTVKNVAFNYIVRLA
- Physico‐chemical
properties -
protein length: 1093 AA molecular weight: 115994,52590 Da isoelectric point: 8,32089 aromaticity: 0,08051 hydropathy: -0,42351
Domains
Domains [InterPro]
DC_0538
STR
1–1091
STR
1–1091
IPR051934
Unmapped
735–1093
Unmapped
735–1093
SSF88874
STR
834–962
STR
834–962
IPR037053
ATT
841–894
ATT
841–894
IPR011083
ATT
846–893
ATT
846–893
1
1093
Architecture
STR 1-840 | ATT 841-894 | STR 895-1092 |
Legend:
ATT
STR
RBD
CBM
LEC
ENZ
CHP
LNK
TAS
TTP
UNK
Unmapped
Tail Spike Domain Segmentation
Tail Spike Domain Segmentation
This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.
Domain Layout
1
1093
| Domain | Start | End | Length (AA) | Confidence |
|---|---|---|---|---|
| N-terminal | 1 | 898 | 898 | 0,0504 |
| Central domain | 899 | 1082 | 185 | 0,1254 |
| C-terminal | 1083 | 1093 | 10 | 0,9943 |
Note: Constraints were applied during segmentation.
Fixed 251 C-terminal predictions appearing before Central domain|C-terminal too short, adjusted boundary
Fixed 251 C-terminal predictions appearing before Central domain|C-terminal too short, adjusted boundary
Legend:
N-terminal
Central domain
C-terminal
3D Structure with Domain Coloring
The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).
Domain Coloring
N-terminal
1-898
1-898
Central
899-1082
899-1082
C-terminal
1083-1093
1083-1093
Taxonomy
| Name | Taxonomy ID | Lineage | |
|---|---|---|---|
| Phage |
Escherichia coli O157 typing phage 6 [NCBI] |
1508681 | Uroviricota > Caudoviricetes > Pantevenvirales > Tevenvirinae > Mosigvirus |
| Host | No host information | ||
Coding sequence (CDS)
Coding sequence (CDS)
Genbank protein accession
YP_009592991.1
[NCBI]
Genbank nucleotide accession
NC_041864
[NCBI]
CDS location
range 5010 -> 8291
strand +
strand +
CDS
ATGGCTACATTAAAACAGATACAATTTAAAAGAAGCAAAGTAGCAGGAGTTAATCCTACTGCAGCACAATTAGCCGAAGGCGAATTAGCGATAAACTTAAAAGATCGAACTCTTTTTACTAAAGATGACCTCGGTAATATTATTAGCCTAGGCTTTGCTAAGGGCGGGGATATTAACGGTAATGTAACTCAAAATGGTGATTATTTACAAAACGGCACGTATAATCTTAATGGAAACCAGTTTGTTTATGCAGGAAAGTATATTGAATTCTTGCCAAAAACTGCTGGAAATGGCGCTTGGGCTAACCAACACACAAATAAAGCCCCTATCTTTACAGATTTGAGTTCAACTACTTCAACTTCTGAATACCACCCTTTGATTAAGCAACGTTATAAAGACGGTACTTTTTCAGTAGGTACATTAGTAAGCGAAGGCTCATTTAGAGTTCATTATATTGATTCTACAGCTCCAGACAATTCTAAACACTGGGTCTTTAACCGTAATGGTAATTTTATTGTAGATTCTGGTAGTATTGAGGTCCGCGCAGGTAATATTTCTGCGTCAGGCAATATTAACTCCGCTAATGGTATAGTTTCTGCTCCACAAGTTAATACGAAAACCATTGTTTTAGACACAAAAGCATTCGGACAATATGATTCACAGTCATTAGTTCAATATGTTTATCCTGGAACAGGTGAAGAAAATGGTATAAACTATCTTCGTAAAGTTCGAGCTAAATCAGGTGGAACTATTTACCATGAAATCGCTTCAGCTCAAACTGGTAAGAATGATGAAATTTCTTGGTGGACCGGAAATACACTTACTACTAAATTAATGGGTCTTCGTAATGATGGCGCAATGGTATTACGTCGTTCACTTGCTATTGGCACAATTACCACTGATGAAAATACCAATAACTACGGCTCTCCTACTCCAATGGGAGAAAGATATATTGCTTTGGGTGATGCTGCCACTGGTTTAAAATACATTAAGCAGGGTGTTTATGATTTAGTAGGTAATTGGAATTCTGTTGCTTCTATTACTCCTGACAGTTTCCGTAGTACTCGTAAAGGTATATTTGGTCGTTCCGAGGACCAAGGCACCACATGGATTATGCCTGGTACAAATGCTGCTCTCTTGTCTGTTCAAACACAAGCTGATAATAACAATGCTGGAGACGGACAAACCCATATCGGGTACAATGCTGGTGGTAAAATGAACCACTATTTCCGTGGTACAGGTCAGATGAATATCAATACCCAACAAGGTATGGAAATTAACCCGGGTATTCTTAAACTAGTAACTGGCTCTAATAATGTAATGTTTTATGCTGATGGCGGTATTACATCTGTTAAGCAGCTTTCAATATATAACGGCATATATTTAGCAGCTAATAATTCTACTGCTGGGCTAACATTCGCTCCAACTACTACAATTGATGGCACTAAGCAAATTTTGTGGGAAGGCGGTACTCGTGCTGGTCAGAATAAAAGCTATGTAACTGTTAAAGCATGGGGTAATTCATTTAACGCATCTGGCGATCGTAATCGTGAAACAGTTTTTGAAGTAGCTGACGGCCAGGGATATTATTTTTATTCTCAGCGCGTAGCTCCAACCGGTTCAGAAACTGTGGGACCTGTTGTAACACAAATTAATGGACAACTGAATGCAAGAGGGAGCATTATCACCGATGGAAGTCTTAGAGTTAATGGATTAAGTACATTATCCGGACAAGTTACTATGGATAACGGGCTTGTTTTATCCGGCGGTGGTTCTATTACCGGTCAAGTTAAAATCGGCAATACCGCAGATGCTTTCCGTATTTACAATGCTGAATATGGAGCTATTTTCCGTCGTTCTGAAGCGTCTTTGCATATTATACCTACACTTAAAGATGCAGGTGAAAATGGTGGTATTTCTAACCTTCGCCCATTGAGTGTTTCTCTTAACAACGGTATGGTTCAAATGCGCCATTCTGTTACGTTAGGTGATGATGGTGCTGGCGGTAATATGGTGACCGTTGATAATGATAATAAACTTGTTGTTATAACTAGTCATAGTCGCATTTCTCCTAATTACCGTATGCAATTAGGACAATCGGCATATATCGACGCTGAATGTACTGATACTGCACGACCTGCTGGAGCCGGTTCTTTTGCTTCTCAGAATAATGAAAACGTTCGTGCTCCGTTCTATATGAATATTGATAGAACAGATACAAGCACTTATGTTCCTATTGTGAAACAAAGATACGTTCAAAATAATAGTTGCTATTCTATTGGTACTTTAATTAATGGTGGTAACTTTAGAGTTCACTATCACGAAGGTGGTGACGGCGTTTCTACTGGCGCAATTATAAAGGATTTAGGTTGGGAATTTAATAAAAACGGTGATTTTTACTCTCCTGGTAAATTAGGCGCTGGTAATGTTCGTATTGGTACTGATGGTAATATCACCGGCGGTTCTGGTAATTTTGCTAACTTGAATACCACAATAAATAACCTTAAGACAGATATTGTCTCAAGTTATCCTATTGGTGCTCCGATTCCTTGGCCTACTGATACACCTCCTGAAGGTTATGCCATAATGGAAGGTCAAACATTTGATACTGGCTTGTATCCTAAGTTAGCTGCGGTGTATCCTTCCGGCACTCTGCCCGATATGCGTGGTCAGACGATTAAAGGTAAACCATCTGGGCGTGATGTATTAAGTACAGAAGCTGATGGTATTAAGTCTCATAACCATAGTGCTTCAGCATCTAATACTGATTTAGGTACTAAAACCACATCAAGCTTTGATTATGGTACTAAAACATCTTCAAGCTTTGATTATGGTACTAAAACCAGTAATACCACAGGTAACCATAACCATACGGTGAGTGGAACTACAAGTGCTGCAGGTAACCACCAACATGCGCGCTCAGGTCCTCAGATACAAGCTGGCATACCCAATAACATATTCTATGACGGATATAATAGTGTAGGTGCAAACGCCAACGCTAAATTCACTGGAACCGTGAACGGTGCTACTGCAGGGTCGAATATAGCCAAAACTTCTTCAGAAGGTAACCATACACACTCTTGGTCAGGAACCACAAGTACCACAGGTAACCATGCTCATACTGTGGGTATTGGTGCTCATACCCATTCGGTAGGTATTGGTGCTCATTCTCATACTGTTGCAATTGGTTCCCATGGACATACAATAACTGTAAATGCCACAGGAAATACAGAAAACACAGTTAAAAACGTTGCTTTTAACTATATCGTTCGTTTAGCATAA
Genome Context
Genome Context
Tertiary structure
PDB ID
531a71771e853646631dd2d52c1c3325f8e07846d87033e9bed2c0847f8d1407
Model Confidence
Very high
pLDDT > 90
pLDDT > 90
High
90 > pLDDT > 70
90 > pLDDT > 70
Low
70 > pLDDT > 50
70 > pLDDT > 50
Very low
pLDDT < 50
pLDDT < 50