Protein

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Genbank accession
YP_010659927.1 [GenBank]
Protein name
tail protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,94
Protein sequence
MAMNAHNPFDAKQDWTNPYCQNSSNDPMVDALLGNAYHVVRTVYCNLGNLKLLYDFLNQYGMVIGVNSVEELKALSTQVKYSRIYGFSRAGDRQVTDYLYVEGDRTGILPNDAAATGSWITVATSGSSGGGTSSGEGAYIPWVYSNGSATGGETTINVPDGTVGVPFIIVNGDMQYVGRGFEFNVDSLSVTLAQPLEEGDEVVFLLTGVPAVPDNPNVNDWIQINWLYNNGAAVGGEQVIAIPYTFQSVPAVYKNGLRLYKGLTTESYTADPDNQRIFLTEPLTTNDRLIVQIGGEARVLEAADRTLQEVARAANVEDNEVIFSTDSTQSLNGKRVVYSVSEQKSYGLPVLPANVYIQSVNAGKLTYSPGEIVVDLLPVPSPVRDELTAYKADLASDSGASKIGIKIPLPGTISRTLQERAEDSVSVKDFGAVPNLTTDSTYAIQAAIDATPSGGTLGFYGGPYRFGTVTVDKPITLVGDADLQFECIRIKTSKFRSFLTGTLTAARYDNACRAFQILAYEDGRDYEDIKVHGARFEGFFYNTDFRGRSYDASESDPTNRVVRDTSIMGCTSVQPKDGKDRGHFQHVGVTNAKCIGNSTYGGKNATSYNFINGNGSLVVIGNYDHDNEYGSLEIENNQISYGVVTGNIFHKLLWIDDTSNINVIGNTCTDRIFITAQSNNSENVSVVGNNVPRIYVSKFGQSPTGRHRNLTIRGNHITGKDVPNCIFLDDSVDSASIEGNDCYGVSGVRGITIIRHSGANHTVRHNNLHGTNLLFSGSGGKVYSYDNFDVGVDESPVTNRTDAMHINNLLRVNEEYLDLPGKYLYKSKYAGEIVQGGSATIELPVSTNGTLSFRGLSLWVLIRNVSTGNFSSYRVDGRHAVFGSSVTVSFGDKYGAVGVNTGDITVSDDSSTANLIRIKVINGHAGQTMQVTVIPEVTSRLGTEE
Physico‐chemical
properties
protein length:945 AA
molecular weight: 102251,35560 Da
isoelectric point:5,06006
aromaticity:0,08995
hydropathy:-0,24413

Domains

Domains [InterPro]
DC_0265
STR
1–732
DC_0265 DC_0828
G3DSA:3.30.2020.50
ATT
299–380
G3DSA:3.30.2020.50 IPR012334
IPR011050
STR
422–773
IPR011050
IPR024535
ENZ
425–484
IPR024535
YP_010659927.1
1 945
Architecture
STR
ATT
STR
RBD
STR 1-298 | ATT 299-380 | STR 381-810 | RBD 811-945
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_010659927.1
1 945
Domain Start End Length (AA) Confidence
N-terminal 1 438 438 0,9933
Central domain 439 815 378 0,9896
C-terminal 816 945 129 0,9808
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-438
Central
439-815
C-terminal
816-945

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage St11Ph5
[NCBI] 		2047765 Uroviricota > Caudoviricetes > Schitoviridae > Gamaleyavirus > Gamaleyavirus St11ph5
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010659927.1 [NCBI]
Genbank nucleotide accession
NC_070873 [NCBI]
CDS location
range 64035 -> 66872
strand -
CDS
ATGGCGATGAACGCACACAACCCCTTTGATGCAAAACAGGATTGGACTAATCCTTACTGCCAGAATAGTTCCAATGACCCAATGGTAGATGCACTGCTTGGTAATGCTTACCATGTGGTTCGTACTGTGTACTGTAACCTGGGTAATCTTAAACTCCTGTATGATTTCCTGAACCAGTATGGGATGGTCATCGGTGTAAACTCTGTAGAGGAATTGAAGGCATTATCCACGCAGGTTAAATATTCCCGTATCTATGGTTTCTCCCGTGCAGGTGACCGGCAGGTAACTGACTACTTGTACGTAGAGGGTGACCGTACAGGTATTCTACCAAATGATGCTGCTGCAACCGGTTCATGGATTACTGTTGCTACTTCTGGTTCCTCTGGTGGTGGTACTTCCTCCGGAGAAGGAGCTTATATCCCTTGGGTATACAGCAATGGTTCCGCTACTGGTGGGGAAACCACAATCAACGTACCAGATGGTACGGTAGGTGTGCCTTTCATTATTGTTAATGGTGACATGCAATATGTAGGGCGTGGTTTTGAATTTAATGTGGATAGCCTGTCAGTAACTCTGGCTCAGCCTCTAGAAGAAGGTGATGAAGTGGTATTCCTTCTGACTGGGGTTCCTGCTGTACCAGATAATCCTAACGTTAATGACTGGATTCAGATTAACTGGTTGTACAACAATGGTGCTGCTGTAGGTGGTGAGCAGGTTATCGCTATTCCTTATACCTTCCAGTCTGTTCCTGCTGTGTATAAGAATGGTCTTCGTTTGTATAAAGGGCTAACTACTGAGTCATATACTGCTGACCCAGATAACCAGCGTATTTTTCTTACCGAACCACTGACAACCAATGATCGTCTTATAGTACAGATTGGTGGTGAAGCACGAGTACTAGAAGCAGCAGATCGTACTCTACAGGAAGTTGCTCGTGCTGCTAATGTGGAAGACAATGAGGTAATCTTTAGCACAGATAGTACCCAGTCCCTTAATGGTAAGAGGGTTGTTTACTCTGTTAGCGAACAGAAGTCTTATGGTTTACCTGTATTACCAGCGAATGTATATATTCAGTCTGTTAATGCAGGTAAGTTAACATATTCCCCTGGCGAAATTGTTGTTGATCTACTTCCTGTACCATCTCCAGTAAGAGATGAGCTGACTGCATATAAAGCGGATTTAGCTAGTGATTCCGGTGCAAGTAAGATTGGTATTAAGATTCCTTTGCCTGGGACAATTTCTCGTACATTGCAGGAACGGGCAGAAGATAGTGTTAGTGTCAAAGATTTTGGTGCAGTGCCCAATCTTACAACAGATAGTACTTACGCCATTCAAGCTGCAATTGATGCGACTCCGTCTGGAGGTACTTTAGGTTTCTATGGCGGACCCTATAGGTTTGGTACTGTTACCGTGGACAAACCTATTACACTAGTTGGAGATGCAGACTTGCAGTTTGAGTGTATTCGTATCAAAACAAGTAAGTTTCGTAGTTTCTTGACAGGGACACTTACTGCTGCGAGATATGACAACGCATGTCGTGCATTTCAAATATTGGCCTATGAAGACGGTAGAGACTATGAGGACATCAAGGTACATGGTGCGCGTTTCGAGGGTTTCTTCTATAACACAGACTTCCGAGGTCGCTCCTACGATGCGTCAGAAAGCGATCCTACCAACAGAGTAGTTCGTGACACCTCTATTATGGGCTGTACTTCAGTTCAGCCTAAAGATGGTAAAGATAGAGGCCACTTTCAACACGTAGGTGTGACCAATGCCAAGTGCATAGGTAACTCGACGTATGGTGGCAAGAATGCTACTTCTTATAACTTCATTAATGGTAACGGCTCTTTGGTGGTTATTGGTAACTATGACCATGACAATGAATATGGATCCTTAGAGATTGAGAATAACCAGATAAGCTACGGTGTTGTTACTGGTAATATCTTCCATAAACTGCTATGGATAGATGACACTAGCAACATTAACGTAATAGGTAACACCTGCACGGATAGGATTTTCATTACTGCACAATCTAACAACTCTGAGAACGTATCAGTAGTAGGAAACAATGTACCTCGCATTTACGTCAGTAAGTTTGGCCAAAGCCCAACAGGTCGTCACCGTAACTTGACTATACGTGGCAACCATATCACTGGCAAGGATGTTCCTAACTGTATATTCTTAGATGATTCTGTTGATTCCGCTTCTATTGAGGGTAATGATTGTTATGGTGTGTCTGGTGTTAGAGGTATAACCATTATTCGCCATTCCGGTGCTAACCATACGGTGCGTCATAATAACTTACATGGCACTAACTTACTCTTTAGTGGTTCAGGCGGCAAAGTTTATAGTTATGACAACTTTGATGTTGGAGTTGATGAATCCCCTGTTACAAACAGAACTGACGCAATGCACATTAACAATCTTCTTCGTGTAAATGAAGAATACCTAGATTTGCCAGGGAAGTACCTATACAAATCTAAGTATGCAGGAGAAATTGTACAAGGTGGGTCAGCTACTATTGAGTTACCTGTATCAACAAATGGTACTTTGTCTTTCCGTGGACTTAGTCTGTGGGTTCTTATCCGTAACGTTTCTACAGGAAACTTTTCTTCCTATCGTGTCGATGGGAGACATGCAGTATTCGGTTCCTCTGTTACTGTTAGCTTTGGTGATAAATACGGAGCAGTAGGGGTAAATACTGGCGATATTACTGTTAGTGATGATTCCTCCACAGCTAATCTTATTCGTATCAAGGTAATCAATGGGCACGCAGGTCAAACAATGCAAGTGACAGTCATACCAGAGGTAACGAGCAGACTTGGGACTGAAGAGTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
f195e479412c431657335bc132c7d88129e1fa863df19ea0811f2d9d156d04db
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7230
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
St11Ph5, a novel member of G7CVirus Podoviridae family Kulikov,E.E., Golomidova,A.K., Letarov,A.V., Babenko,V.V. and Kostryukova,E.S. 2018-01-11 — GenBank