Protein

View in Explore
Genbank accession
AZU99654.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MSIRVLGVLQTPMSQVVQNVPIKVVTSSGFGNVLTTSEAIYFTDNQGNYDFNLAFGTHELYVMFTDTFEHIGTTVANDSLTDSSYTISELLYYTTPLPNQNEQCIRDDFGGCISALETAWDTCIVQLSQQVVQGDTGVCTAMTTYTNDRLQACSAELTDTIVAGDAAVLLESQAYADATGAEITCCTTSLNTALVDICSTLTAYTTSNDIAIACLCTDMDAGDAQVLQTAEAYSDTCAGIVCSNLVNMVQACDAAVYTCMNVIDNGQGLQQAGYEIVTQAGDACASIALVATACTEAAVQESCILMQADKIIMHNGNPNTQSYPFQVVGNCVYMDAAYIRCLTGDKLVSNTTIKAGTGITTAGMNGDDSGSETSNLNKGYRFWAGYWDARNSTGIPTAPFRVTDNGALIASNAYITGCINTTCLVFCDASAVPPEITNAQLTADSAVSNLLNTNLWVVGYRGDSDNNACNTFIRNGDSDENYVSTTSGGPFGQGGLVWRTKTNSNTADTPDGGWTYCATQNFSVSKSYLHAVWACQTTLDGQIFFGTTRYVGMNSADGTQTSDNPYFWSGDLPQLNKWYLLVGVVHARGYTAGETGVTGVYDPDTGTKVASGVDWVMPPSGTVTNVTQRVFWYYSADVNGPIQYFYKPGLWEMGNAPSVQELMGKSYDRALTAETNACNKAVSACNCGISCGDAAKTCAVNEGTAACAWTENRIYPCQSQIQIKSGNYVVGSTGWAIDCSGNAEFNNAIVRGTISAATGCFCGSIYAQCIIGDVTSGLNKAATTQVKSGSTGNTPLFAVICVSGSMPYPRTLQLSALISVWATSTGEAGNPTQASAKLVTTSTQFTAVNTAKIWACSQSGNTHQCVVTGIHQVAINIPANTTGSINIYGHLDDLNGAANGGMCIASPYSNNTISAILFRNGNDLC
Physico‐chemical
properties
protein length:925 AA
molecular weight: 97670,75420 Da
isoelectric point:4,31814
aromaticity:0,08432
hydropathy:-0,00368

Domains

Domains [InterPro]
DC_1333
STR
14–450
DC_1333 DC_1439
IPR015406
RBD
271–350
IPR015406
AZU99654.1
1 925
Architecture
STR
RBD
STR 14-450 | RBD 716-923 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AZU99654.1
1 925
Domain Start End Length (AA) Confidence
N-terminal 1 333 333 0,5999
Central domain 334 532 200 0,3650
C-terminal 533 925 392 0,9574
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-333
Central
334-532
C-terminal
533-925

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio virus vB_VspP_SBP1
[NCBI] 		2500581 Uroviricota > Caudoviricetes > Schitoviridae > Electravirus Sbp1 >
Host Vibrio sp.
[NCBI] 		678 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AZU99654.1 [NCBI]
Genbank nucleotide accession
MK301608.1 [NCBI]
CDS location
range 51525 -> 54302
strand -
CDS
ATGTCCATTCGAGTTTTGGGTGTCTTGCAGACACCTATGAGTCAAGTGGTACAGAACGTCCCGATTAAAGTTGTAACCTCAAGTGGCTTCGGTAATGTCTTAACGACTTCCGAGGCCATTTATTTTACCGACAACCAAGGTAATTATGACTTTAATCTCGCGTTCGGTACTCATGAACTATATGTGATGTTCACAGATACATTCGAGCATATCGGTACAACGGTAGCCAACGATTCTCTGACTGACTCGTCATATACAATTTCGGAACTGTTGTATTACACAACTCCGTTACCGAATCAAAATGAACAGTGTATCCGTGATGACTTTGGCGGCTGTATTTCAGCGCTCGAAACTGCATGGGACACTTGTATTGTTCAACTATCACAACAGGTAGTACAAGGTGACACTGGTGTGTGTACCGCGATGACTACCTATACCAATGACCGATTACAGGCTTGTTCTGCTGAGTTAACCGACACTATTGTGGCCGGTGACGCGGCTGTTCTCTTAGAAAGTCAAGCTTATGCTGATGCGACTGGTGCGGAGATTACTTGCTGTACCACTTCATTAAATACAGCGTTAGTAGACATCTGCTCTACGCTAACTGCGTACACTACTTCGAATGATATTGCGATTGCCTGTCTATGTACTGACATGGATGCTGGAGATGCCCAAGTACTTCAGACTGCGGAAGCATATTCTGACACTTGTGCAGGCATTGTGTGTTCGAACTTGGTGAATATGGTTCAAGCCTGTGATGCTGCAGTCTATACCTGTATGAACGTAATTGATAATGGCCAGGGTTTACAACAAGCTGGTTATGAAATTGTTACTCAAGCAGGTGATGCGTGTGCAAGTATTGCTCTCGTGGCCACTGCTTGTACGGAAGCTGCGGTACAAGAATCCTGTATCTTGATGCAAGCTGACAAAATTATCATGCATAACGGTAATCCAAACACTCAAAGCTACCCATTCCAAGTAGTTGGTAATTGTGTATATATGGATGCAGCATATATTCGTTGTTTGACAGGAGATAAGTTAGTTTCAAATACAACCATTAAAGCTGGAACCGGTATAACAACAGCAGGGATGAATGGGGATGATTCTGGGTCTGAAACCTCTAACCTAAATAAAGGTTATCGATTTTGGGCAGGTTACTGGGATGCTCGCAATTCTACAGGAATTCCGACGGCTCCTTTTCGTGTAACAGATAACGGTGCGCTTATTGCTTCAAATGCTTATATTACTGGGTGTATTAATACTACTTGCTTGGTTTTTTGTGATGCTAGTGCAGTACCGCCTGAAATCACTAATGCCCAGTTAACTGCAGACAGTGCAGTATCTAACTTACTTAATACAAACTTATGGGTTGTAGGGTATCGAGGGGATTCTGATAATAATGCTTGTAATACTTTCATTAGAAACGGAGACTCCGATGAAAACTATGTGAGTACAACTTCTGGTGGTCCTTTTGGACAAGGTGGCTTAGTTTGGCGTACCAAAACAAATAGTAATACTGCAGACACTCCTGATGGGGGTTGGACGTACTGCGCTACGCAAAACTTCTCAGTGAGCAAGTCTTACTTACATGCTGTTTGGGCGTGTCAAACCACATTAGATGGGCAAATATTTTTTGGTACTACTAGATATGTGGGTATGAACAGTGCAGATGGTACACAAACGTCAGATAACCCTTACTTTTGGTCTGGGGATTTGCCTCAATTAAATAAGTGGTATCTGCTCGTTGGTGTAGTGCATGCTCGTGGGTATACTGCCGGAGAAACAGGTGTTACCGGTGTTTATGACCCCGACACAGGCACTAAAGTAGCATCTGGTGTAGATTGGGTTATGCCACCTAGTGGTACTGTTACTAACGTTACCCAACGGGTTTTTTGGTATTACTCTGCTGATGTTAATGGCCCTATACAGTATTTCTACAAACCAGGATTATGGGAGATGGGTAACGCCCCTTCCGTTCAAGAACTAATGGGCAAGTCGTACGACCGCGCATTAACAGCTGAAACCAATGCATGTAATAAAGCTGTGAGTGCCTGCAACTGTGGTATATCTTGCGGTGACGCAGCAAAAACTTGTGCAGTAAACGAAGGTACTGCTGCTTGTGCTTGGACAGAAAACCGCATTTACCCTTGTCAAAGTCAAATTCAAATCAAATCCGGTAACTACGTTGTTGGTTCAACTGGTTGGGCAATTGATTGTAGTGGTAATGCTGAGTTCAACAATGCTATTGTACGTGGCACTATCAGTGCTGCCACAGGTTGTTTTTGTGGTTCCATATATGCTCAGTGTATTATTGGGGATGTTACATCTGGTTTGAATAAGGCTGCAACAACTCAAGTAAAATCCGGCTCCACGGGGAATACGCCGTTATTTGCAGTGATTTGTGTATCCGGCTCTATGCCATATCCACGCACCCTTCAATTAAGTGCCTTAATTAGTGTGTGGGCTACAAGTACAGGTGAAGCGGGAAACCCAACCCAAGCATCAGCTAAACTGGTGACGACTAGTACACAATTCACTGCTGTTAATACTGCTAAAATTTGGGCATGTTCCCAAAGCGGTAATACACACCAATGCGTGGTTACTGGTATTCATCAAGTTGCAATAAATATACCCGCAAACACCACAGGAAGTATAAATATTTATGGGCATTTAGATGATTTGAATGGTGCAGCAAATGGTGGTATGTGTATAGCATCCCCTTATTCAAATAATACTATTTCTGCGATTTTATTTCGTAATGGTAATGACTTATGTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
07712b93ddd6d2a275cb08c52e5b483d42fd1d8631711689e479a4cd4fd89a05
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5492
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterization of a N4-like bacteriophage infecting a coral-derived Vibrio strain Huang,S. 2019-10 — GenBank