Protein

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Genbank accession
AQT25227.1 [GenBank]
Protein name
minor tail protein
RBP type
TSP
Evidence RBPdetect
Probability 0,88
Protein sequence
MSYSFLRESKIIIEYEGRRYTFSALSTMNYDTTMAEYKVNRRTVHGKSNYPVSIVTGFNPVTLSLIVNFSNNSLESMFFEWLGMERDGNTLYLPFNSKLEPTYLKVYIQYQSGAIFELTPAYVSNADFSLEKGIPELSVGIIASNVTQLRELLPHPSLDQSEVSIPSPLFCTMNGIDLPSIRGSGLSFQQQCTWREEKSIYEIGQMSYPKKAVINEMNFSANINMYKREVHGKPESNFLKIDEPLYGYHLQIYTSKILVDIPSARVTKRLTADETLSMSLDIIPMYNSPAPVSITFK
Physico‐chemical
properties
protein length:297 AA
molecular weight: 33803,26870 Da
isoelectric point:5,88974
aromaticity:0,11448
hydropathy:-0,20707

Domains

Domains [InterPro]
IPR056389
ATT
1–296
IPR056389
AQT25227.1
1 297
Architecture
ATT
ATT 1-296 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AQT25227.1
1 297
Domain Start End Length (AA) Confidence
N-terminal 1 293 293 0,8829
Central domain 294 293 1 0,2655
C-terminal 294 297 3 0,8276
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-293
Central
294-293
C-terminal
294-297

Taxonomy

  Name Taxonomy ID Lineage
Phage Providencia phage vB_PreS_PR1
[NCBI] 		1931407 Uroviricota > Caudoviricetes > Demerecviridae > Priunavirus PR1 >
Host Providencia sp.
[NCBI] 		589 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AQT25227.1 [NCBI]
Genbank nucleotide accession
KY363465 [NCBI]
CDS location
range 93902 -> 94795
strand -
CDS
ATGAGTTACTCTTTTCTTAGAGAGTCGAAAATAATCATAGAATATGAGGGGAGGCGCTATACGTTTTCTGCTCTATCAACAATGAATTATGACACGACTATGGCTGAATATAAAGTAAATAGACGGACTGTTCATGGAAAGAGTAACTATCCTGTATCTATAGTAACTGGGTTTAACCCAGTTACTCTTTCTTTAATAGTAAACTTCTCCAATAATAGTCTTGAGTCTATGTTTTTTGAGTGGTTAGGGATGGAGAGAGATGGCAATACATTATACTTGCCTTTTAATTCCAAACTTGAACCTACTTACCTAAAAGTATATATTCAATACCAAAGTGGAGCGATTTTCGAGCTAACCCCTGCATATGTTTCAAATGCTGACTTCTCTCTAGAGAAAGGTATCCCTGAACTAAGTGTCGGTATTATAGCCTCCAATGTTACTCAATTAAGGGAACTACTTCCACATCCATCACTGGATCAATCTGAAGTTAGTATTCCTAGTCCTTTATTCTGTACAATGAACGGAATTGACCTGCCATCTATTAGGGGATCTGGTCTATCTTTCCAACAGCAGTGTACATGGAGGGAGGAGAAATCAATCTACGAGATTGGTCAAATGAGTTATCCGAAAAAGGCTGTAATAAACGAAATGAATTTCTCAGCTAATATAAATATGTACAAACGAGAAGTACATGGTAAGCCTGAAAGTAACTTCCTGAAGATAGATGAACCTTTATACGGTTATCATCTCCAGATTTACACAAGTAAAATATTAGTGGACATCCCTAGTGCTAGGGTGACTAAACGCCTAACTGCTGATGAGACTCTCTCTATGAGCTTGGATATAATTCCAATGTATAACTCACCAGCTCCCGTAAGTATAACATTTAAGTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
502883d0c88de022af2dc7a95f8d4572468e16bb14e1f246d31e21acb9821b23
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8010
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Providencia rettgeri phage vB-PreS_PR1 - a deep-branching member of the T5-like siphoviruses Oliveira,H., Pinto,G., Hendrix,H., Noben,J.-P., Gawor,J., Lobocka,M., Lavigne,R. and Azeredo,J. 2017-12 — GenBank