Protein

View in Explore
Genbank accession
QDH83812.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,77
Protein sequence
MPLKTMVLRDEKGSPLTNAEMDGNLRSVLEFMNGIVLPQTAHDLDDYDTPGVYGQNATAGAVAGSNYPVPVAGVLTVKSGGGAGNIVAQQTYRTYYQSSQVSEWYRNKGTAGWSPWYQRARMDQVMSKTVLSASAVVDANTLTTDNMWWVWTSGAVMQNGSNFPPAALNSSGIMETQVITASYMVQTCTLTPTSTRRPIEFRRIGNGSTTWSSWRVISPVQIVGDLPTADCGDVYVDGSGWYKWASGGYILASTSVLLPATAHNLNDYDLPSEWYQGTAAIATTANNYPVGAVGFLSIKQFGSAVLQTYVTRENTPRTFTRTKNGTTAWSSWVESASTTQAMTHVFLTSATDANTLTEDNVFYTWVASAALGDNFPQFSTNWPAAGYMRVYRSAPTQVAQELTFLITGQRSRTFTRFGNSVNGTWQPWKSTSAWHAATGLPTTDMGDIYVDGVGVYRWSPTDSSYVRWSPDVPNDLYLIKNTARIYGNFESSNGPLGSVAIKSSNTASPHTVLSIVPRVEGGASSVTLWTGDATAVAGLNINSSLTAHNFTSVALNGASHRPIVWYQVNERCGALNTAATWEFGPAASYPVLCRIGINFDGGSTRYGVAMRPNANDTRFFHFCNAAGGDVGSITQSASAVFYNTTSDYRVKKEIEDLDVEVGLNSVLMARPRKFRMKEDNSLHNGFIAHELQEVIPEAVTGVKDDVWPVEAGNGPRMRLQGVDMSKLVPHLVAAVQALNKKLDAAFERIAELERRQ
Physico‐chemical
properties
protein length:756 AA
molecular weight: 82206,92420 Da
isoelectric point:6,16160
aromaticity:0,10185
hydropathy:-0,23029

Domains

Domains [InterPro]
DC_1584
STR
27–195
DC_1584 DC_1584 DC_1584 IPR030392
cd19958
STR
40–118
cd19958 cd19958 cd19958 cd19958 DC_0203
IPR030392
CHP
646–700
IPR030392 Coil
QDH83812.1
1 756
Architecture
STR
RBD
STR 27-645 | RBD 646-756
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QDH83812.1
1 756
Domain Start End Length (AA) Confidence
N-terminal 1 401 401 0,2652
Central domain 402 600 200 0,0770
C-terminal 601 756 155 0,9978
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-401
Central
402-600
C-terminal
601-756

Taxonomy

  Name Taxonomy ID Lineage
Phage Achromobacter phage vB_AxyS_19-32_Axy06
[NCBI] 		2591049 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QDH83812.1 [NCBI]
Genbank nucleotide accession
MK962627.1 [NCBI]
CDS location
range 17170 -> 19440
strand +
CDS
ATGCCTTTGAAGACTATGGTCCTTCGCGACGAGAAGGGTTCTCCTCTCACGAACGCGGAGATGGACGGCAACTTGCGCTCCGTTTTGGAGTTCATGAACGGCATCGTTTTGCCGCAAACGGCCCATGACCTGGACGATTATGACACTCCGGGGGTGTATGGCCAGAACGCCACTGCAGGGGCCGTGGCAGGTAGCAATTACCCGGTCCCAGTCGCTGGAGTGTTGACCGTTAAAAGCGGTGGCGGCGCAGGCAATATCGTTGCCCAACAAACTTATCGCACGTACTACCAAAGCTCTCAGGTGAGCGAATGGTACCGTAATAAAGGGACCGCAGGATGGTCCCCATGGTATCAGCGCGCCCGTATGGACCAAGTCATGTCCAAAACGGTCCTTTCTGCTTCAGCGGTGGTAGACGCGAATACCCTTACTACGGATAATATGTGGTGGGTATGGACCAGTGGCGCGGTGATGCAGAACGGCAGTAATTTTCCGCCTGCAGCTCTTAATAGCTCTGGTATCATGGAAACGCAAGTTATTACGGCCTCGTATATGGTCCAAACTTGCACTTTGACTCCAACGTCAACCCGCCGCCCTATCGAGTTCCGTCGTATTGGCAACGGCTCGACTACGTGGTCGAGCTGGCGAGTTATTTCCCCTGTACAAATCGTGGGCGATCTGCCAACGGCGGACTGCGGGGACGTATATGTAGACGGTTCTGGCTGGTACAAGTGGGCCTCCGGCGGGTACATTTTGGCGAGCACGTCTGTGCTGTTGCCCGCGACTGCCCATAACCTTAATGATTACGACCTTCCTAGCGAATGGTATCAGGGCACGGCGGCAATCGCCACCACGGCCAACAATTACCCAGTTGGCGCCGTAGGCTTTCTGAGCATAAAGCAGTTCGGCAGCGCTGTGCTGCAAACCTATGTAACGCGTGAGAATACTCCTCGTACCTTTACGCGTACAAAGAACGGTACTACGGCCTGGTCCTCGTGGGTGGAATCTGCCTCCACTACCCAGGCTATGACTCACGTATTCCTAACGAGTGCCACGGACGCTAACACGCTGACGGAAGACAACGTCTTTTACACATGGGTCGCGTCGGCCGCTTTGGGAGACAACTTTCCTCAATTTTCCACGAACTGGCCGGCTGCCGGGTATATGCGCGTATACCGCTCTGCCCCGACGCAGGTAGCTCAAGAGCTTACTTTCCTCATAACAGGACAGCGCTCTCGTACCTTCACGCGCTTTGGCAATAGCGTTAATGGCACTTGGCAGCCCTGGAAGTCGACTAGTGCATGGCACGCTGCGACCGGTTTGCCAACCACTGACATGGGCGACATCTACGTCGACGGCGTCGGTGTTTATCGCTGGTCGCCAACGGATTCCAGCTATGTTCGTTGGAGCCCAGATGTACCTAACGATCTGTATTTGATTAAGAACACGGCTCGAATTTACGGGAACTTCGAAAGTAGTAACGGTCCCTTGGGCAGCGTAGCGATCAAGTCGAGCAATACTGCAAGCCCGCACACAGTGTTGAGCATTGTTCCGCGCGTCGAAGGTGGGGCGTCGTCTGTTACGCTGTGGACTGGAGACGCTACAGCCGTAGCCGGGCTCAATATAAATTCCTCGTTGACGGCGCACAATTTCACGTCGGTGGCTCTTAACGGTGCTTCTCATCGTCCGATTGTATGGTACCAAGTGAACGAGCGCTGCGGGGCCCTGAATACTGCTGCAACTTGGGAGTTTGGCCCAGCTGCCTCGTACCCGGTACTGTGCCGAATTGGCATCAACTTCGATGGGGGCTCGACTCGCTACGGCGTGGCTATGCGCCCCAACGCCAACGACACGCGCTTCTTCCATTTCTGCAATGCTGCAGGCGGAGATGTTGGTTCCATTACGCAAAGTGCGTCCGCTGTCTTCTATAACACCACGTCTGACTACCGGGTCAAAAAGGAAATAGAAGACCTCGACGTGGAGGTCGGGCTCAACTCGGTACTTATGGCCCGTCCGCGCAAGTTCCGTATGAAGGAAGATAACAGCCTGCACAACGGATTTATTGCCCACGAGCTTCAAGAAGTTATTCCGGAAGCAGTGACCGGCGTTAAGGACGACGTGTGGCCAGTAGAGGCGGGCAACGGCCCGCGTATGAGGCTGCAGGGCGTTGACATGAGTAAGCTTGTACCGCACTTGGTCGCAGCTGTGCAGGCTTTGAACAAAAAACTGGATGCGGCTTTTGAGCGCATCGCTGAATTGGAGCGTAGACAGTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
fcb9649b1863895e75339ee201150358fa20dfc7da679e947176d3972d46ad0d
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7395
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of sixteen phages from Abidjan, cote d'Ivoire, isolated on a single strain of Achromobacter xylosoxidans Essoh,C., Vernadet,J.-P., Vergnaud,G. and Pourcel,C. 2020-01-02 — GenBank