Protein

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Genbank accession
QDK00357.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,57
TF
Evidence RBPdetect2
Probability 0,94
Protein sequence
MSRNLMPKSGAMAPYIVVNRDAAVAGVFSVDGEAGAVVLTSKYLQISKYNIDQQELNTRLSGIDTSINNTNESVSSINESIGGINSALGGINTSIESINTGLDTKAGKGANNDITELNSLTKAITIAQGGTGSSTVDGAKTALELDRFSQEFGTETRVYSGDKSSRLTIQNSGAWGAYSDVENKWISLSVEQGGTGVTNREALWSVVRPQGPTPLSGDPVNDYDAATKRWVQNLVNTGTVGPTMNGVMNYGVGDFHLRDSRAYIQPYEVLSDGQLLNRADWPELWAYAQMLSPISDAEWLADPEKRGRYSTGNGSTTFRVPDRNGAQPNSTLSLFGRGDGGNSSEDGRVYEAAAPNIYGTAANDTSGKVWQPAPKAVSGAFGYNSAVEDTFLPNDGTFSRVRNNAVLTINAGASDGVYGKYSIKNNILPRSFVGVWVIRASGGFVAANTSWSVNNADAVLPPVNTVVSGGRVSSKYKVGVTDNFSADFYAQAAIGNGITEARVEAHGTNTAVMRFNSNGHLYIPGTLLPQNGLETQSNLVARALFGNSDAYTATIVKLKSQESLDGVRHNKLSHLENSDCTVANYIYTVDGVAQYTWQLTRSDNINLWYSMRADSTMHTPLGQVAIQGSDVRIKDNFKLPKSGAWERIEQIGIVEFTYKGNVVPQRGYLAQQMEAIDPIYVFSGGQSVDDNGKEFEILNVNDKAVMADIITVVQELQKQIVDYKEQLEYMQRELNALRSSK
Physico‐chemical
properties
protein length:741 AA
molecular weight: 79953,72910 Da
isoelectric point:5,15293
aromaticity:0,08232
hydropathy:-0,35277

Domains

Domains [InterPro]
DC_0017
STR
1–741
DC_0017
IPR030392
CHP
629–727
IPR030392
IPR030392
CHP
629–678
IPR030392 Coil
QDK00357.1
1 741
Architecture
STR
STR 1-741
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QDK00357.1
1 741
Domain Start End Length (AA) Confidence
N-terminal 1 455 455 0,4610
Central domain 456 654 200 0,2010
C-terminal 655 741 86 0,9935
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-455
Central
456-654
C-terminal
655-741

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage vB_EcoS-26175III
[NCBI] 		2576480 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QDK00357.1 [NCBI]
Genbank nucleotide accession
MK907269.1 [NCBI]
CDS location
range 76827 -> 79052
strand -
CDS
ATGTCACGTAATTTAATGCCTAAATCTGGCGCAATGGCGCCATATATTGTAGTTAACAGAGATGCTGCTGTTGCTGGTGTTTTCTCTGTTGATGGAGAGGCTGGTGCTGTTGTATTAACTTCTAAATACTTACAAATCTCTAAGTATAATATAGATCAGCAAGAATTAAACACTCGTCTAAGTGGAATTGATACTTCTATTAACAATACTAATGAGTCTGTTAGTAGCATTAACGAGTCTATTGGGGGTATTAATTCTGCTTTGGGTGGTATTAACACATCCATTGAGAGTATTAATACTGGCCTAGATACTAAAGCAGGTAAGGGTGCTAATAACGATATTACAGAACTAAATTCACTTACCAAAGCTATTACTATTGCTCAGGGTGGTACTGGTTCTTCTACTGTAGATGGGGCTAAAACTGCACTAGAACTTGATAGATTTAGCCAGGAATTTGGAACAGAAACTCGAGTGTATAGTGGAGATAAAAGCTCAAGGTTAACTATTCAGAATTCAGGTGCTTGGGGTGCGTATAGTGACGTAGAAAACAAGTGGATATCATTATCTGTTGAACAGGGAGGTACAGGAGTAACCAATAGGGAAGCTTTATGGTCTGTTGTTAGGCCACAAGGTCCTACTCCACTGTCTGGTGATCCGGTTAACGATTATGATGCAGCGACGAAACGTTGGGTGCAAAACCTTGTAAATACAGGCACTGTCGGCCCGACAATGAATGGTGTAATGAACTATGGCGTTGGTGATTTCCATCTTCGTGATAGTCGTGCGTATATTCAACCATATGAAGTCTTATCAGATGGTCAATTGCTAAATCGCGCAGACTGGCCTGAATTGTGGGCATACGCTCAAATGTTATCGCCTATTTCCGATGCTGAATGGCTTGCTGACCCAGAAAAACGAGGTAGGTATTCAACGGGTAACGGATCTACTACCTTCCGTGTGCCTGACCGGAACGGTGCGCAACCAAATTCTACGTTAAGTCTTTTTGGGCGTGGTGATGGTGGTAATTCTTCCGAAGATGGGCGTGTCTATGAAGCGGCAGCACCTAATATTTATGGTACGGCAGCAAACGATACAAGCGGAAAAGTTTGGCAACCAGCACCTAAAGCTGTAAGCGGAGCTTTCGGATATAATTCTGCAGTTGAAGATACATTTTTACCTAATGATGGTACTTTTAGCAGAGTAAGAAACAACGCAGTATTAACAATTAACGCTGGGGCCAGTGATGGAGTCTATGGAAAATATTCAATAAAAAACAACATATTGCCCCGTAGTTTTGTTGGTGTTTGGGTTATTCGTGCATCTGGTGGTTTTGTTGCGGCAAATACTTCTTGGAGTGTTAACAATGCCGATGCAGTATTACCTCCAGTGAATACTGTAGTAAGTGGCGGCAGAGTTAGTTCAAAGTATAAAGTAGGAGTTACCGATAACTTTAGTGCAGATTTCTACGCACAAGCAGCAATTGGAAATGGAATTACCGAAGCAAGGGTTGAAGCACATGGAACAAATACAGCAGTAATGCGTTTTAATTCTAATGGACACCTTTATATACCAGGGACTTTACTACCACAGAATGGATTAGAAACACAATCAAACCTTGTAGCTCGAGCACTTTTTGGGAATTCTGACGCATACACTGCTACAATTGTAAAGCTAAAAAGCCAAGAGTCGTTAGACGGTGTTAGACACAACAAGTTATCCCATCTTGAAAACTCTGACTGTACGGTAGCCAACTACATTTATACCGTAGATGGAGTTGCACAATATACATGGCAATTAACAAGATCTGATAATATAAATCTCTGGTATTCTATGCGAGCGGACAGCACAATGCATACTCCTTTAGGGCAAGTTGCTATTCAAGGTTCTGATGTTCGTATCAAAGACAATTTTAAATTGCCGAAATCGGGTGCGTGGGAACGAATTGAACAAATAGGGATCGTAGAATTCACATATAAAGGAAATGTAGTTCCCCAGCGTGGGTATTTAGCACAGCAGATGGAAGCTATTGACCCTATTTATGTTTTTAGTGGAGGTCAGTCTGTAGATGATAATGGAAAAGAATTTGAGATTCTAAACGTAAATGATAAGGCTGTTATGGCTGATATTATCACAGTTGTACAGGAACTACAAAAACAAATAGTGGACTATAAGGAACAGTTAGAATATATGCAGAGAGAACTTAATGCACTAAGAAGTTCTAAGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
d825601c24300e4e4d4f0659bd8f33cba0d840f41a0da53a0b0d70f4b3719566
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6747
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Natural Occurrence of Escherichia coli-Infecting Bacteriophages in Clinical Samples Pacifico,C., Hilbert,M., Sofka,D., Dinhopl,N., Pap,I.-J., Aspoeck,C., Carrico,J.A. and Hilbert,F. 2019 — GenBank