Protein

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Genbank accession
YP_001294817.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MLRLGWSGSLGVPPGAGPGPGGTVAYVGAAQGSITDLSVTKARGEAGSRGIVHIRGPIARLTLQDVESPTNVVQTENNSRVRGAMVVRMQDVALTHPTGGRILSTAGPTKAYLSNVTAASEAGGKITFLDPSVVGSEIHGAIRMPAGSVLARGGYDVGVTVSDPTLPIDVTTVIPTAGAACWNSNASGLVGLGVGPAVCNGSQWKSLYTGATFTPAIIDSITPTGAGAGATITITGRGLTGAQQVSVGGTPATILSTTATQITATMPTGTPGNVLVKVNNSSGVGSNGVSTPAGDPAELGTSKNCPPFRSEEMRWTPTR
Physico‐chemical
properties
protein length:319 AA
molecular weight: 31795,54610 Da
isoelectric point:9,14860
aromaticity:0,03448
hydropathy:0,06364

Domains

Domains [InterPro]
DC_1863
RBD
8–215
DC_1863 IPR013783
IPR013783
STR
214–291
IPR013783
IPR014756
STR
217–289
IPR014756
IPR002909
RBD
217–288
IPR002909
YP_001294817.1
1 319
Architecture
RBD
STR
RBD 8-213 | STR 214-291 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_001294817.1
1 319
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,1215
Central domain 11 206 197 0,7111
C-terminal 207 319 112 0,3349
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-206
C-terminal
207-319

Taxonomy

  Name Taxonomy ID Lineage
Phage Microbacterium phage Min1
[NCBI] 		446529 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Microbacterium nematophilum
[NCBI] 		151262 cellular organisms > Bacteria > Bacillati > Actinomycetota > Actinomycetes > Micrococcales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_001294817.1 [NCBI]
Genbank nucleotide accession
NC_009603 [NCBI]
CDS location
range 34560 -> 35519
strand +
CDS
ATGCTCCGCTTGGGGTGGTCAGGATCTCTGGGTGTACCGCCCGGGGCGGGTCCGGGACCGGGTGGGACGGTCGCGTACGTCGGTGCGGCGCAGGGGTCGATCACGGACCTGTCCGTCACCAAAGCGCGCGGGGAGGCAGGGTCTCGGGGCATCGTGCACATTCGTGGGCCGATCGCCCGCCTCACCCTCCAGGATGTGGAGTCCCCGACGAACGTCGTCCAGACGGAGAACAACAGCCGGGTCAGGGGGGCGATGGTGGTGCGGATGCAGGATGTCGCCCTCACCCACCCCACCGGGGGTCGCATCCTCTCCACCGCCGGACCCACCAAGGCCTACCTCTCCAACGTCACCGCAGCCAGCGAGGCGGGCGGGAAGATCACCTTCCTTGACCCGTCTGTGGTGGGGTCGGAGATCCATGGGGCGATCCGCATGCCGGCCGGGAGCGTCCTGGCCCGTGGCGGGTACGACGTGGGAGTGACGGTCTCCGACCCGACCCTCCCCATCGACGTCACCACCGTGATCCCCACAGCCGGGGCCGCCTGCTGGAACAGCAACGCCTCCGGGCTCGTCGGGCTCGGTGTGGGTCCCGCGGTCTGCAACGGCTCCCAGTGGAAGTCGCTGTATACGGGGGCGACGTTCACTCCGGCGATCATCGACAGCATCACCCCCACTGGGGCCGGTGCCGGGGCGACCATCACCATCACCGGACGCGGCCTCACCGGAGCCCAACAGGTCTCCGTCGGGGGCACTCCGGCGACGATCCTCTCCACCACCGCCACCCAGATCACCGCGACCATGCCCACCGGCACCCCCGGAAACGTCCTCGTCAAGGTCAACAACAGCAGTGGCGTGGGCTCGAACGGGGTCTCTACACCCGCGGGTGATCCCGCCGAGCTGGGCACCTCGAAAAACTGCCCGCCCTTCCGTAGTGAGGAGATGCGATGGACGCCCACCAGGTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
231cdbdc9190b6564fe02b1fee98c583858e9104a821ee374e243f0f951c2f00
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6628
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50