Protein

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Genbank accession
YP_009781269.1 [GenBank]
Protein name
TmpF
RBP type
TSP
Evidence RBPdetect
Probability 0,66
Protein sequence
MANFLKNLHPLLRRDRNKKDNQDPNFALIDALNEEMNQVEKDAIESKLQSSLKTSTSEYLDKFGDWFGVYRKTDEKDDVYRARIIKYLLLKRGTNNAIIDAIKDYLGRDDIDVSVYEPFTNIFYTNKSHLNGEDHLMGYYYRFAVINVSIGDYFPVEIIDVINEFKPAGVTLYVTYDGASTIRGGAIIKWLDGLPKIETYQEFDRFTGYDDTFYGHINMNQSKDTDNSSSDIFKTNHSLINSLDVLTGSSSVGRQYINYGYVTSYVYNPGMTSSVNQISASTEGRGQEVPTDYYMYTSTKNNNTVELSMQTTSGVSYLYNNFNFRDYMSKYRPQVDLQSDEARRIVSDYIKELSIDYYLSAVIPPDESIEIKLQVYDFSINRWLTVSINNLSFYEKNIGSNIGYIKDYLNSELNMFTRLEINAGKRDSVDIKVNYLDLMFYYYERGIYTIKPYKALIENYLDISRETYVEAFKIASLSNGDIITKTGFQPIGYLKLVGNYENTIPSTINIVAKDTDNNPIESNELDVYNTVENRNLLQSYKGVNTIAREITSTKEFTVSGWAKEIYSTNYLSKVLKPGKVYTLSFDMEITGNDPTLKSYSDSHGIYLYSNTKGIVVNGVKSMERTIGNKVSVTQTFTAPTITDHRLLIYTGRYTSDGKASTPPVFFNTVKITELKLTEGSSKLEYSPAPEDKPNVIEKGIKFNNILTNIQTLSINSDTILKNVTLYYSYYGDSWVELKTLGNISTGETTETNNLIDLYGLQTVDYSNINPMSKVSLRSIWNVKLGELNNQEGSLYNMPNDYFNAVWQDIDKLSDIELGSMRMVKDTEGGVFDGATGEIIKATLFNVGAYTDLDMLAYTLTNYTEPLTLGSSRLIIELKEELLTSESFNVDNRIKVIDSIYEELPNTSIIKNGFVEREVTGSKYLDYGLYEPIEDGTRYKLIVEGEFKDNIEFISLYNSNPNFNETFIYPSEIINGVAEKEFIAKPSTEDKPRLNTDVRIYIRPYDSTISKVRRVELRKV
Physico‐chemical
properties
protein length:1019 AA
molecular weight: 116351,12030 Da
isoelectric point:4,92001
aromaticity:0,11776
hydropathy:-0,42915

Domains

Domains [InterPro]
IPR060691
STR
27–120
IPR060691 DC_1746
Coil
Unmapped
29–49
Coil
YP_009781269.1
1 1019
Architecture
STR
STR
STR 27-120 | STR 464-780 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009781269.1
1 1019
Domain Start End Length (AA) Confidence
N-terminal 1 638 638 0,6298
Central domain 639 928 291 0,2337
C-terminal 929 1019 90 0,1869
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-638
Central
639-928
C-terminal
929-1019

Taxonomy

  Name Taxonomy ID Lineage
Phage Staphylococcus phage Fi200W
[NCBI] 		1195078 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009781269.1 [NCBI]
Genbank nucleotide accession
NC_047725 [NCBI]
CDS location
range 77209 -> 80268
strand +
CDS
GTGGCTAATTTTTTAAAGAATCTTCATCCATTATTAAGAAGAGATAGAAATAAAAAAGATAATCAAGACCCTAACTTTGCTCTGATAGATGCACTCAATGAAGAGATGAATCAAGTAGAGAAAGATGCTATAGAAAGTAAGTTACAATCTTCTCTAAAGACATCTACCAGTGAATATTTAGATAAGTTTGGGGATTGGTTCGGAGTTTATCGTAAGACCGATGAGAAAGATGATGTTTATAGAGCAAGAATTATAAAATATTTACTCTTGAAAAGAGGAACTAATAATGCTATAATAGATGCTATAAAAGATTATTTAGGTAGAGATGATATTGATGTAAGTGTATATGAACCTTTTACAAATATTTTCTATACTAACAAATCACATTTAAATGGTGAAGACCACTTAATGGGATACTATTATAGATTTGCTGTTATTAATGTCTCTATAGGTGATTATTTCCCTGTAGAGATTATAGATGTAATTAATGAATTCAAACCTGCAGGTGTAACTCTATATGTCACTTATGATGGGGCTTCTACTATTAGAGGTGGAGCAATTATTAAGTGGTTAGATGGGTTACCTAAAATAGAAACATACCAAGAGTTTGATAGATTTACAGGTTATGATGATACATTCTATGGTCATATTAATATGAATCAAAGTAAAGATACTGATAACAGTTCATCAGATATTTTTAAAACAAACCATAGCTTAATTAATAGTTTAGATGTTTTAACAGGTTCATCTAGTGTAGGGAGACAGTATATTAACTACGGATATGTAACATCATATGTTTATAATCCAGGTATGACATCTTCTGTAAATCAAATAAGCGCTAGTACAGAAGGTAGAGGTCAAGAAGTACCTACTGACTATTATATGTATACTAGTACTAAGAATAACAATACAGTAGAACTTAGTATGCAAACTACTTCCGGTGTGTCTTATTTATATAATAACTTTAATTTTAGGGACTATATGAGTAAATATAGACCTCAAGTAGATTTACAATCTGATGAGGCTAGAAGAATTGTATCTGATTATATAAAAGAATTAAGTATTGATTACTATCTTAGTGCTGTGATACCTCCTGATGAAAGTATAGAAATTAAACTACAAGTTTATGATTTTTCTATTAATAGATGGCTTACAGTATCAATTAATAATTTATCTTTCTATGAAAAAAATATCGGGAGCAATATAGGATATATAAAAGATTATCTAAACAGTGAATTAAATATGTTTACTAGGTTAGAGATAAATGCAGGTAAAAGAGATTCAGTAGATATTAAAGTTAATTACTTAGATTTAATGTTTTATTACTATGAACGAGGTATTTATACAATAAAACCGTATAAAGCATTAATAGAAAATTATTTAGATATATCTAGAGAGACTTATGTAGAAGCATTTAAAATAGCATCATTATCTAATGGAGATATTATAACTAAAACAGGTTTTCAGCCTATAGGGTATTTAAAACTAGTTGGTAATTATGAAAATACAATACCTAGCACAATAAATATAGTAGCTAAAGATACAGATAATAACCCTATAGAATCTAATGAATTAGATGTATATAATACAGTAGAGAATAGAAATTTATTACAATCTTATAAAGGTGTAAATACGATAGCTAGAGAAATAACTTCTACAAAAGAGTTTACTGTATCAGGATGGGCTAAAGAGATATACTCAACTAATTATCTTTCTAAAGTATTAAAACCAGGTAAAGTGTATACGTTATCTTTTGATATGGAAATAACAGGTAATGACCCAACTCTTAAATCTTATTCTGATAGTCATGGTATATATTTATACAGTAATACTAAGGGAATTGTTGTTAATGGTGTTAAATCTATGGAACGTACTATAGGTAACAAAGTATCCGTAACTCAAACTTTTACAGCCCCTACTATTACTGACCATAGATTACTAATATATACTGGAAGATATACATCTGATGGTAAAGCATCAACTCCTCCAGTGTTCTTTAATACAGTTAAAATTACGGAATTAAAATTGACTGAGGGTTCTTCTAAGCTAGAGTACTCACCTGCTCCGGAAGATAAACCTAACGTAATAGAAAAAGGAATTAAATTTAATAATATCCTAACTAATATACAGACTTTAAGTATTAATTCGGATACTATCTTAAAAAATGTAACTTTATATTATTCTTACTATGGTGATAGTTGGGTAGAACTAAAGACTCTAGGAAATATTAGTACTGGAGAAACAACAGAAACCAATAACTTAATAGATTTATATGGATTACAGACAGTAGATTATTCTAATATAAATCCAATGTCTAAAGTATCATTACGTTCCATTTGGAATGTTAAGCTAGGTGAATTGAACAATCAAGAAGGTTCTTTATATAATATGCCTAATGATTACTTTAATGCTGTATGGCAGGATATAGATAAATTATCAGATATTGAGCTAGGTTCTATGAGAATGGTTAAAGACACTGAGGGCGGAGTATTCGATGGAGCTACAGGTGAAATTATTAAGGCTACTCTATTTAATGTCGGTGCTTATACTGATTTAGATATGTTAGCCTATACTTTGACTAATTATACTGAACCGTTAACGTTAGGCTCTAGTCGATTAATAATTGAGCTAAAAGAAGAACTACTAACATCAGAATCATTTAATGTCGATAATAGAATTAAAGTAATTGACTCAATATATGAGGAGTTACCAAATACAAGCATTATTAAAAATGGATTTGTTGAAAGAGAAGTTACAGGTTCTAAATATTTAGATTACGGTTTATATGAGCCTATAGAAGATGGTACTAGATATAAACTTATTGTCGAAGGAGAATTTAAAGATAATATAGAATTTATATCTTTATACAATTCTAACCCTAACTTTAATGAAACATTTATATATCCATCAGAGATAATTAATGGAGTTGCTGAAAAAGAATTTATTGCAAAACCATCTACTGAAGACAAACCAAGGTTAAATACAGATGTTAGAATATATATACGACCTTATGATTCAACTATCTCTAAAGTAAGAAGAGTAGAATTAAGGAAAGTTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
218aee91eda27109bd0290dc8656743145d30b9180835593970812f1219e9807
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2700
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50