Protein

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Genbank accession
YP_010844738.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,71
Protein sequence
MTNRLNYPEYWAQDGEALDPDLDTTAPSYIPDRYETVGWEAEKPPEQWQNFLTQITDVKIREMLLGGILQWCDTVIYSLGAFALVDGKIYQKREEIPGNISPPTSGSGWQEVLETNLTQYNAKVQYLKNMFNAHMAEQNPHKDTVDTIVDGTYLQDYVYDRFASDERVTTIPYHISRTGASVHRVTPAQLNTLPTSGGTFSGPVVFLQEAYAGTGVSQYIHRNDATGIFEIVNGTFAIGVDSGGKAWYIDSTGSYEVLTEANYDAFNIKYGNSFALPARLMSANFRADVSDAESTGQWWVETASTPVFTNGGYKIDDNAMTMFGCEVVIPCTVVSVVVLSTGAVSFGVWDATSFNYPDGFDVKSVLEAALFPGQTISVIRYMAVYPRLSDNQRSMLTRQ
Physico‐chemical
properties
protein length:399 AA
molecular weight: 44272,86220 Da
isoelectric point:4,52679
aromaticity:0,12030
hydropathy:-0,23709

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_010844738.1
1 399
Domain Start End Length (AA) Confidence
N-terminal 1 245 245 0,8243
Central domain 246 388 144 0,5990
C-terminal 389 399 10 0,7366
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-245
Central
246-388
C-terminal
389-399

Taxonomy

  Name Taxonomy ID Lineage
Phage Yersinia phage PYps16N
[NCBI] 		2801354 Uroviricota > Caudoviricetes > Chaseviridae > Carltongylesvirus > Carltongylesvirus PYps16N
Host Yersinia pseudotuberculosis
[NCBI] 		633 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010844738.1 [NCBI]
Genbank nucleotide accession
NC_079179.1 [NCBI]
CDS location
range 45301 -> 46500
strand +
CDS
ATGACAAATCGTTTGAATTACCCAGAGTATTGGGCGCAGGATGGCGAAGCACTTGACCCCGACTTGGATACAACTGCACCATCGTATATTCCAGATAGATATGAAACTGTTGGTTGGGAAGCTGAAAAGCCCCCAGAACAATGGCAGAACTTCTTAACTCAAATCACTGACGTCAAGATTCGAGAGATGTTGCTTGGTGGCATACTGCAATGGTGTGATACCGTAATATATTCGCTTGGAGCTTTTGCATTAGTTGATGGTAAGATTTATCAGAAGCGGGAAGAGATTCCTGGAAACATAAGTCCTCCAACTTCTGGAAGTGGATGGCAGGAAGTTCTTGAGACCAACCTCACTCAGTATAACGCCAAGGTTCAATATCTAAAGAACATGTTCAATGCCCACATGGCAGAACAGAACCCACACAAAGATACTGTGGACACAATTGTTGATGGGACATACCTTCAAGATTATGTGTATGACAGGTTCGCCAGTGACGAACGGGTTACAACAATCCCGTATCATATCTCCAGAACTGGTGCATCTGTTCACCGAGTAACTCCAGCACAGTTGAATACTCTACCAACATCTGGTGGTACATTCTCTGGTCCTGTTGTCTTCTTGCAGGAGGCATATGCTGGCACTGGCGTATCCCAATACATCCACCGCAATGATGCAACTGGCATATTCGAAATTGTAAATGGTACGTTTGCAATTGGTGTGGATAGTGGTGGCAAAGCTTGGTACATAGATTCGACTGGCTCTTATGAAGTCTTAACAGAAGCGAACTACGATGCTTTCAATATTAAGTATGGTAACTCGTTTGCACTCCCTGCAAGACTAATGTCAGCCAACTTCCGAGCAGATGTAAGTGATGCCGAATCAACTGGTCAGTGGTGGGTGGAAACAGCATCAACTCCAGTGTTCACCAATGGTGGATACAAGATTGATGACAATGCCATGACTATGTTTGGGTGTGAAGTTGTCATACCTTGTACAGTGGTATCTGTTGTAGTCTTGTCAACTGGTGCTGTTTCATTTGGTGTGTGGGATGCCACAAGCTTCAACTATCCTGACGGATTTGATGTTAAGTCTGTTCTTGAAGCCGCACTATTCCCAGGACAAACAATCTCAGTTATTCGTTATATGGCAGTCTACCCAAGACTCTCAGACAATCAACGTTCAATGCTTACGAGACAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
d12460c4a103c0d0efe2db8a3dc25a328aa178b5f94643f16dd5a2545d1f68f5
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5886
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genome of Yersinia pseudotuberculosis phages Hammerl,J.A. and Hertwig,S. 2018-05-10 — GenBank