Protein

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Genbank accession
YP_009321546.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence RBPdetect
Probability 0,90
Protein sequence
MLSELEAASANIFTAVGKNLVNPAEIRRGKYYSPGNVAVSSSPSYRCTGFIAVTPGETYTLQGVQSGNAAGYFSSASDNAAVATVQLSGNTSVGATFTVPNDPNISYVVVNVTYEGQDVTTYDMTAQLELGSAATEYEAFGVKIHGSDISGFDSKLDKRYLIEQVSKNLIDLSAVDFNRRYSQNSLSFTADTLGIATTDWIPVEEGEYYTISGDGVYGTDIQGGYFTQYGSDTAVSNIEDFAPPAGIGRVIQVPIGEGITHVVISLQKAGSDPGATTLAGNVQVEKGELATSYKPFSQEEKIKQKFLPESFSGANIGITANLNSDAWYKYTEGEEGSYLSDKIPNFRRHWLMRDKDLAVVNTGTSLTARSSEHCTLKSDAHLRPPLMHSNNAASILWDKMRWDNQHYRRYDSGMFSEAGTFSTVTSLSEWDDGPYRAGLTRYTEDASASISFEIPTDAWQFNFIYRTDSLGCAAQLVISEGDGQVEVLDSLGNWVEANGHEFSMSETAPVTRTVNVPDPDTGSTVSVSIQSKGNTTYQKRLKMRCKSSLIDSRSVVKSMRVEKLTTGRFMYWGVEWSPREFMLTYINAARGSHNTNALGASGLPRFADNEVWGFKPDLMFFELPTHNDGAAAVSSNPSGRWGRLVDNFVFNLSYELSMKSRASHFGLDPEICMFTSSIAYNFGGISPEGTLKFSDNSEGTKVLTALDKYNESYSWVLDNHPEVVFINSVRRWVDAGEAIFGDLRTATEASGKAGATFTNEGSHWNDTGSKIIAKTLTPVFKFI
Physico‐chemical
properties
protein length:783 AA
molecular weight: 85563,89930 Da
isoelectric point:5,01481
aromaticity:0,10728
hydropathy:-0,31992

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009321546.1
1 783
Domain Start End Length (AA) Confidence
N-terminal 1 180 180 0,3927
Central domain 181 431 252 0,6151
C-terminal 432 783 351 0,3581
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-180
Central
181-431
C-terminal
432-783

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudoalteromonas phage PH1
[NCBI] 		1874540 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudoalteromonas marina DSM 17587
[NCBI] 		1117316 Pseudomonadota > Gammaproteobacteria > Alteromonadales > Pseudoalteromonadaceae > Pseudoalteromonas > Pseudoalteromonas marina

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009321546.1 [NCBI]
Genbank nucleotide accession
NC_031908 [NCBI]
CDS location
range 105 -> 2456
strand +
CDS
ATGCTCAGTGAGTTAGAGGCAGCGAGTGCTAATATTTTCACCGCAGTAGGTAAAAACCTAGTTAATCCTGCTGAAATACGTCGGGGTAAATACTACTCACCTGGTAATGTAGCAGTGTCTTCATCGCCTTCATATCGATGCACAGGGTTTATAGCTGTTACACCGGGTGAAACCTACACTTTACAAGGAGTGCAATCTGGTAATGCAGCAGGTTATTTCAGTTCTGCTTCAGACAACGCTGCAGTAGCTACAGTACAGCTCTCAGGTAATACAAGTGTCGGAGCTACTTTTACTGTCCCTAATGACCCTAACATTAGCTATGTTGTAGTAAACGTAACTTATGAAGGTCAAGACGTTACTACTTATGACATGACAGCTCAATTAGAGCTTGGTAGTGCAGCGACAGAGTATGAAGCTTTTGGAGTTAAAATACACGGTAGTGATATCAGTGGTTTTGATTCTAAGTTAGACAAGCGCTATCTTATTGAACAAGTTAGTAAAAACCTAATAGACTTATCCGCAGTAGACTTTAATCGTCGGTATTCGCAAAACTCTTTGAGTTTTACTGCGGACACTTTAGGCATTGCCACTACTGATTGGATTCCTGTCGAAGAAGGAGAATACTACACTATATCTGGCGATGGTGTATACGGTACAGACATACAAGGTGGGTACTTTACCCAGTATGGTTCAGACACAGCTGTGTCTAATATCGAAGACTTTGCTCCTCCAGCAGGTATAGGTAGAGTAATACAAGTGCCTATAGGTGAAGGTATTACACATGTAGTTATATCACTGCAAAAAGCTGGAAGTGACCCAGGCGCTACTACTTTAGCAGGCAATGTTCAGGTAGAGAAAGGAGAACTAGCTACTAGCTACAAACCTTTCTCTCAAGAAGAGAAAATAAAGCAGAAGTTCCTTCCTGAAAGTTTTTCGGGAGCTAACATAGGTATAACAGCCAACTTGAACTCTGATGCCTGGTATAAGTACACTGAAGGGGAAGAAGGTTCTTACCTATCTGATAAGATACCTAATTTTCGCAGACACTGGCTTATGCGAGATAAGGACCTAGCAGTAGTTAACACTGGCACAAGCTTAACTGCTAGAAGTAGTGAGCACTGTACACTTAAGTCGGACGCACACTTGAGGCCTCCACTTATGCACAGTAATAACGCAGCATCTATACTGTGGGATAAAATGCGGTGGGATAACCAACATTATCGCCGATACGACTCGGGTATGTTTAGTGAGGCAGGAACATTTAGTACTGTTACTAGCTTGAGTGAGTGGGATGATGGGCCTTACCGTGCAGGGCTTACAAGATATACTGAGGACGCATCAGCTAGTATTAGTTTTGAGATTCCTACTGATGCTTGGCAGTTTAACTTCATCTATAGAACAGATAGCTTAGGTTGTGCAGCCCAACTAGTTATTTCGGAAGGTGATGGACAGGTTGAGGTACTAGATAGTTTGGGCAACTGGGTAGAGGCAAATGGACATGAGTTTAGTATGAGTGAAACTGCGCCGGTTACTAGAACAGTTAATGTACCCGACCCTGACACTGGAAGTACAGTATCTGTATCAATACAATCGAAAGGTAATACTACTTACCAAAAACGACTTAAGATGCGTTGTAAGTCATCGCTAATCGACTCTAGAAGTGTTGTTAAGAGCATGCGAGTAGAGAAGCTAACTACAGGTCGGTTTATGTACTGGGGTGTGGAGTGGTCCCCTAGAGAGTTCATGCTAACATATATAAATGCGGCGCGAGGTAGTCATAACACAAACGCACTAGGTGCTTCAGGTCTACCTCGCTTCGCAGACAACGAAGTGTGGGGATTTAAACCAGACCTTATGTTTTTTGAGCTACCTACGCATAATGATGGTGCTGCTGCTGTATCTTCAAACCCCTCAGGTAGGTGGGGAAGACTGGTAGACAACTTCGTGTTTAATTTAAGCTACGAACTATCTATGAAGTCTCGTGCCTCACACTTTGGGTTAGACCCTGAGATTTGTATGTTCACTAGCTCTATAGCATACAATTTCGGTGGTATCAGCCCAGAAGGTACGCTTAAGTTCTCAGATAATTCGGAAGGTACAAAAGTGCTAACAGCGCTGGATAAGTACAACGAATCCTATAGCTGGGTGCTAGACAACCATCCTGAGGTTGTATTTATCAACTCTGTACGTCGGTGGGTAGATGCAGGTGAAGCTATATTTGGCGACTTAAGGACAGCTACGGAAGCTAGTGGTAAAGCAGGCGCCACCTTTACTAACGAAGGTAGCCATTGGAATGACACAGGAAGTAAAATTATAGCTAAAACACTTACCCCAGTGTTCAAATTTATCTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
c275972e8268b891388a670d9dee1249e4dfd82ea230309105e43754ba79fc83
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6894
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation and Characterization of a novel Pseudoalteromonas phage PH1 Liu,Z. 2016-12-09 — GenBank