Protein

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Genbank accession
AIM51274.1 [GenBank]
Protein name
tail spike protein
RBP type
TSP
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MSKLTRPNTAGILHRGASLQKHLDDMGVSVGMFLTVAATVKDAVQMAVDYAPDHKGPVTVSFPRGEYEFTDIVIPRRGVNLKLGDAVLKASSGVMFKRQFTQTTAETFKATYQPVRGKHYFLPITVEDGIVELTDTARFIDIRQPYLWEYTIGSFKTLTVDRTNITVYDTASAFGIHGGWGFFFNNVNVNGDLDKKTGFGNSVGSGLVLDMRPDGTYHTASHAQLIQFNGCFIGYTKLVDSNKGTNDSSCEALYFFDCNMMMVEGGYVDACNLFEMSGGIFVTTAKELILNRMAGAIIRDMQVQRYNNPRTDERYGVITFVGGGSDISVRDIRSNFGSGVTGSMICVEANNNHFIDVAFSDIQCVGDAYDAAVTDVNKQTSVVRLITRGTGTIVGCQIHNITGRSVHNIVDMGDQAATGSMRRFDISDIRNISTDCKRRVRGLSANVQSLVAPQLFQRLELRMRGTSNSSGGNEFCKTDTLCLGMTGTIIPTRITTANVSNATSLAAVDASLEGGGVSIGLYQAAGLPAGARVEATATFEFNSSESILA
Physico‐chemical
properties
protein length:549 AA
molecular weight: 59413,57520 Da
isoelectric point:6,22474
aromaticity:0,08379
hydropathy:-0,06230

Domains

Domains [InterPro]
IPR012334
STR
41–446
IPR012334
AIM51274.1
1 549
Architecture
STR
STR 41-446 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AIM51274.1
1 549
Domain Start End Length (AA) Confidence
N-terminal 1 39 39 0,9636
Central domain 40 437 399 0,9939
C-terminal 438 549 111 0,9882
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-39
Central
40-437
C-terminal
438-549

Taxonomy

  Name Taxonomy ID Lineage
Phage Lelliottia phage phD2B
[NCBI] 		1542498 Uroviricota > Caudoviricetes > Autographivirales > Molineuxvirinae > Tuodvirus
Host Lelliottia sp. GL2
[NCBI] 		1542666 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Lelliottia

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AIM51274.1 [NCBI]
Genbank nucleotide accession
KM370384.1 [NCBI]
CDS location
range 40326 -> 41975
strand +
CDS
ATGTCAAAGCTCACAAGGCCTAACACGGCAGGGATTCTTCACCGTGGAGCCTCCCTGCAAAAGCACTTAGACGATATGGGTGTATCGGTGGGTATGTTCCTCACTGTGGCTGCTACCGTAAAGGATGCAGTTCAGATGGCGGTGGATTACGCACCAGACCACAAAGGCCCTGTAACAGTGTCTTTCCCTCGCGGGGAGTATGAGTTCACTGATATCGTCATCCCGCGCCGAGGGGTTAACCTCAAGTTGGGAGATGCCGTTCTCAAGGCTTCCTCTGGTGTTATGTTCAAAAGACAGTTCACCCAGACAACTGCCGAGACCTTCAAGGCTACATATCAGCCAGTCAGAGGCAAACACTACTTCTTACCCATCACTGTTGAAGATGGCATCGTAGAGCTTACTGACACTGCAAGGTTCATCGACATTCGACAGCCGTACCTGTGGGAGTATACAATCGGGTCTTTCAAGACTCTGACAGTAGATCGCACCAACATCACGGTGTATGACACGGCATCTGCTTTTGGCATCCACGGTGGCTGGGGTTTCTTCTTCAACAACGTCAATGTGAATGGTGATCTTGATAAGAAGACCGGGTTCGGCAACTCAGTTGGCTCCGGTCTGGTGCTAGATATGCGCCCGGATGGCACATATCACACGGCGTCACACGCACAGCTTATCCAGTTTAACGGATGCTTCATCGGGTACACTAAGCTAGTTGATTCCAACAAAGGAACCAATGATAGCAGTTGTGAAGCGCTATACTTCTTCGATTGTAATATGATGATGGTAGAAGGTGGGTATGTTGATGCGTGTAACCTGTTTGAGATGTCAGGTGGCATCTTTGTCACTACCGCTAAGGAGCTTATCCTTAACCGCATGGCTGGTGCTATCATTCGTGATATGCAGGTGCAACGGTACAATAATCCTCGCACAGATGAACGTTACGGTGTAATCACCTTCGTAGGTGGTGGTAGTGATATTAGTGTCCGTGATATCCGCTCTAACTTCGGCAGCGGTGTTACTGGCTCTATGATCTGCGTAGAGGCCAACAACAACCACTTCATAGATGTGGCCTTCTCTGACATCCAGTGTGTTGGTGATGCTTATGATGCAGCGGTTACAGATGTGAACAAGCAGACCTCTGTGGTTCGTCTTATCACCCGTGGTACTGGGACAATCGTTGGTTGTCAAATCCACAACATCACAGGTCGCTCCGTACACAACATTGTGGACATGGGGGATCAGGCTGCTACTGGCTCTATGCGTCGCTTTGATATCTCTGACATCAGAAACATCAGCACAGACTGTAAGCGCCGTGTCCGTGGGTTGTCTGCTAACGTGCAGTCTCTGGTTGCACCACAGTTGTTCCAGCGCCTTGAACTTCGTATGCGTGGCACCTCCAATAGTAGTGGTGGTAATGAGTTCTGCAAAACAGATACACTGTGTCTTGGGATGACAGGCACTATCATACCTACGCGCATCACAACAGCTAACGTATCCAACGCGACATCCCTTGCGGCTGTTGACGCATCCTTGGAAGGCGGTGGTGTTAGTATTGGCCTGTATCAGGCCGCTGGTCTCCCTGCTGGTGCAAGGGTAGAGGCAACTGCTACATTCGAGTTTAACTCCTCGGAAAGCATCCTCGCGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
da5b7ace7533e012c02c838c2aba5cefb9279a8055ad4251bceb42eb21f05cb0
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6902
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50