Protein

View in Explore
Genbank accession
WCD56323.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence RBPdetect
Probability 0,82
Protein sequence
MTSLINTRFPNGVTNVLDNDLFQAMPQPDPTKLYELDDDFFSYHASEWTVTETQAGATQALGAGVGSWLVLTNSAANNDLNMVQRTFALASFAAGKRAWFKARFKVDNANLAALVVGMQNINTAPLTATDGIYFTKAGGTTNLSVICRRNTTTGSTSAVVGTLADDTFVEVGWYYNGVDRVLFSLNGNVVGSLDGSSTFLPDANCSVVVAVANGSAVARTLTADYVYFGFER
Physico‐chemical
properties
protein length:232 AA
molecular weight: 24774,37850 Da
isoelectric point:4,64650
aromaticity:0,10776
hydropathy:0,07284

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Caulobacter phage RLK
[NCBI] 		3020399 No lineage information
Host Caulobacter crescentus
[NCBI] 		155892 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Alphaproteobacteria > Caulobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WCD56323.1 [NCBI]
Genbank nucleotide accession
OQ135106 [NCBI]
CDS location
range 47384 -> 48082
strand -
CDS
ATGACCTCGTTGATCAATACGCGCTTCCCGAACGGCGTGACCAATGTTCTGGACAACGATCTGTTCCAGGCTATGCCGCAGCCGGACCCGACCAAGCTGTACGAGCTGGACGACGACTTCTTCTCGTACCACGCGTCGGAGTGGACCGTCACTGAGACGCAAGCCGGTGCGACCCAAGCGCTCGGCGCTGGCGTCGGTAGCTGGCTCGTTCTGACCAACAGCGCCGCGAACAACGACCTGAACATGGTGCAGCGCACCTTCGCGCTGGCGAGCTTCGCCGCCGGTAAGCGCGCGTGGTTCAAGGCGCGGTTTAAGGTCGACAACGCCAACCTCGCCGCGCTGGTCGTCGGCATGCAAAACATCAACACCGCGCCGCTGACCGCCACCGACGGCATCTACTTCACCAAGGCGGGCGGCACCACCAACCTGAGCGTCATCTGTCGCAGGAACACGACGACGGGCTCGACGTCGGCGGTTGTTGGCACGCTGGCCGACGACACCTTTGTCGAGGTGGGCTGGTACTACAACGGTGTCGACCGGGTCCTGTTCTCGCTGAACGGCAACGTGGTGGGCTCGCTGGACGGCTCGTCTACGTTCCTGCCCGACGCCAACTGCTCGGTCGTGGTCGCTGTCGCCAACGGTTCGGCCGTGGCGCGCACCCTGACCGCCGACTACGTGTACTTCGGCTTCGAGCGCTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
c0531c5823112ec178c1672199a50870d07799ed8887a54af9df4e056a66cbfb
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8009
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
New Genera and Species of Caulobacter and Brevundimonas Bacteriophages Provide Insights into Phage Genome Evolution Ely,B., Hils,M., Clarke,A., Albert,M., Holness,N., Lenski,J. and Mohammadi,T. 2024 — GenBank