Protein

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Genbank accession
XLD54484.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
Protein sequence
MTDIFTGIVDSATQLANDARNTLMGDGTATLRFRNCGGIKMDAVTNEEHSSELEIADNELESGAKASDHAAIQPKVITVTGVVVGYLDTSIQEDTISDITGLRTLDFLDDIELPKVVSTVLESTRDLAVNKLASFIDWGGLDATISSSLVPWLPDFSIAEQLKPSDNLRIESVYRKLLDFQKNVIYCDVDTGIFKYTNMLLKSVRVVQEKDGSATFTLTFREILEVPIVVTNAVAAKSTGRPANTGSKKSGRAQAQGDATTKKDINTTTSISDKKANDNRGFNVTLGDIFGVNLRGLF
Physico‐chemical
properties
protein length:298 AA
molecular weight: 32276,98750 Da
isoelectric point:4,82139
aromaticity:0,06040
hydropathy:-0,14463

Domains

Domains [InterPro]
DC_0601
STR
1–295
DC_0601
IPR048494
ATT
41–226
IPR048494
XLD54484.1
1 298
Architecture
STR
ATT
STR
STR 1-40 | ATT 41-226 | STR 227-295 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage VB_ST-SA173
[NCBI] 		3366564 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Salmonella enterica
[NCBI] 		28901 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XLD54484.1 [NCBI]
Genbank nucleotide accession
PQ351918.1 [NCBI]
CDS location
range 13390 -> 14286
strand +
CDS
ATGACTGACATCTTTACAGGTATTGTTGACTCGGCTACGCAGTTGGCGAATGACGCTCGTAACACACTCATGGGCGATGGTACCGCCACACTCCGTTTCAGGAACTGTGGTGGTATTAAGATGGATGCAGTCACCAACGAAGAGCACTCCTCTGAGTTGGAGATTGCAGACAACGAACTTGAGTCTGGTGCCAAGGCGTCAGACCATGCTGCTATCCAGCCGAAGGTGATAACGGTCACAGGCGTGGTTGTGGGTTACCTGGACACGTCGATTCAGGAAGACACAATCAGTGATATTACCGGCCTGAGAACGCTTGATTTCTTGGATGATATAGAGCTTCCTAAAGTAGTGTCTACTGTCCTCGAAAGTACAAGGGACTTAGCAGTAAACAAGCTAGCTTCCTTTATAGACTGGGGTGGTTTAGACGCTACCATTTCTAGCTCTTTAGTTCCTTGGTTGCCTGACTTTAGTATAGCGGAACAGCTGAAGCCTTCGGACAACTTACGTATCGAATCTGTGTACCGTAAGTTACTGGACTTCCAGAAAAACGTTATCTATTGTGACGTTGACACGGGTATTTTTAAATACACGAATATGCTTCTGAAGTCTGTTCGTGTGGTACAAGAGAAAGACGGTTCAGCCACTTTCACTTTGACTTTCCGTGAGATACTGGAAGTACCAATTGTTGTTACCAACGCTGTAGCTGCTAAGTCAACTGGCAGACCTGCTAACACAGGTTCTAAGAAAAGCGGACGAGCGCAAGCTCAGGGTGATGCAACGACGAAGAAAGATATTAACACAACTACATCTATTAGTGATAAGAAGGCGAATGATAACCGAGGCTTCAACGTTACACTCGGTGACATCTTCGGCGTTAACCTGCGAGGTCTGTTCTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
f7caf7611cb2dc81512f2ca8a484d2cae56ca38b5c620491c8704b396fe04f87
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6704
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Salmonella phage VB_ST_SA173 Sherif,M.M., Abdelaziz,N.A., Saleh,S.E. and Aboshanab,K.M. 1988-03 — GenBank