Protein

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Genbank accession
AZU98470.1 [GenBank]
Protein name
DNA condensation protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MIPFPRIISYGNILPKTKIKKVVSYYGFIFVLFDDGQAFGTGDNTSGQLGDGTLVNKNTWVKCPIENIKDIYVGVDCTLIITENNKVFFTGYRASLGASSGYLNTFTEITSTFNNFDLNKAKLMFGSRGLFLLQDEQLYAIGQGTYASNNQYGNIGLGTTPSASFKHVASGVKEIYSSLSSSSDASFYISTSGELFGTGRNLYGTLGLGFSSEQPIFYKVPFTLPIKTIILSANNVLIITESNDVYMSGFRGNGLCADGTTASSYYTTLTKNTLIDSELASKFVQYTNSFCSEGAIYLCTSESIYSSGSDYYGRFGIGNTSTIIYSTLVQNGFLQDIIFDPTHVVQGGYYVYYWHENTVYAVGNSRWIPGSTEDFTKWNKVPMQPRII
Physico‐chemical
properties
protein length:388 AA
molecular weight: 42701,51290 Da
isoelectric point:5,69114
aromaticity:0,14433
hydropathy:-0,04691

Domains

Domains [InterPro]
IPR009091
STR
3–115
IPR009091 IPR009091
IPR051210
Unmapped
16–324
IPR051210
IPR009091
STR
16–351
IPR009091
PF13540
STR
19–48
PF13540
IPR009091
STR
20–351
IPR009091
AZU98470.1
1 388
Architecture
STR
STR 3-384 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AZU98470.1
1 388
Domain Start End Length (AA) Confidence
N-terminal 1 114 114 0,1686
Central domain 115 338 225 0,3987
C-terminal 339 388 49 0,6948
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-114
Central
115-338
C-terminal
339-388

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage Munch
[NCBI] 		2500169 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Salmonella
[NCBI] 		590 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AZU98470.1 [NCBI]
Genbank nucleotide accession
MK268344 [NCBI]
CDS location
range 335124 -> 336290
strand -
CDS
ATGATTCCGTTTCCAAGAATTATATCATATGGTAATATTTTACCAAAAACTAAAATTAAAAAAGTTGTTTCGTATTATGGATTTATTTTTGTACTATTTGATGATGGTCAAGCATTTGGTACTGGTGATAATACAAGTGGTCAATTAGGTGATGGAACATTAGTAAACAAAAATACATGGGTAAAATGTCCAATCGAAAATATAAAAGATATATATGTTGGTGTTGACTGTACTTTAATTATTACTGAAAATAATAAAGTGTTTTTTACTGGTTATCGAGCATCATTGGGAGCATCATCTGGATATTTAAATACATTTACTGAAATAACATCAACTTTCAATAACTTTGATTTAAACAAAGCCAAATTAATGTTTGGAAGTAGAGGATTATTTTTATTACAAGATGAACAGCTTTATGCTATTGGTCAAGGAACATATGCATCAAATAATCAGTACGGTAATATTGGTTTAGGTACTACACCTTCAGCATCATTTAAACATGTAGCTAGTGGTGTGAAAGAAATTTATAGTTCATTAAGTTCATCAAGTGATGCCTCATTTTATATTAGTACATCAGGTGAACTTTTCGGTACTGGAAGAAATTTATATGGAACTTTAGGTCTAGGATTTTCAAGTGAGCAACCTATATTCTATAAAGTACCGTTTACATTGCCAATAAAAACCATTATTTTAAGTGCTAATAATGTCTTGATTATTACAGAAAGCAATGATGTATATATGAGCGGGTTTCGTGGTAATGGTTTATGTGCTGATGGGACTACTGCATCTTCTTATTACACGACACTAACAAAAAATACATTAATTGATTCTGAATTAGCCAGTAAATTTGTTCAGTACACAAATAGTTTTTGCAGTGAAGGAGCAATTTATCTTTGTACTTCAGAATCTATATATAGTTCTGGTTCTGATTACTATGGTAGATTTGGAATAGGTAATACATCAACAATAATATATTCAACCTTAGTGCAAAATGGTTTTCTTCAAGATATTATCTTCGATCCAACACATGTTGTTCAAGGTGGTTATTACGTGTATTATTGGCATGAAAATACGGTATATGCAGTGGGTAATTCAAGATGGATACCGGGGTCAACTGAAGATTTTACCAAATGGAATAAAGTTCCAATGCAACCAAGAATAATATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
f1c0607db9ab44068cc66c45980861a57d714c54cb21d5947ef9ad3d1029989b
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,9003
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of Salmonella myophage Munch Crosby,S.T., O'Leary,C.J., Xie,Y., Gill,J. and Liu,M. 1988 — GenBank