Protein

View in Explore
Genbank accession
YP_009801220.1 [GenBank]
Protein name
tail protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,56
Protein sequence
MARVGGSYESVVRGVSEQAPQDRRSGQMHEQVNMISDPVRGNVRRHGSEFQAGLQITPQSEAPTRAQVNEYAKGATTRTYYCDGRELELIYRKGPKVGKLPNIQCYDKTQGKFLQVIMGGGGVCADIDQQGVSGLVNIGKFAFISGATFKPTWTINKNLPGQDENNSGVIWVRQGAFSRTYTVRMKLADGRTVVAEHKTMPATYEGKLDTSDIVWDKDDPGKYTKAVTDRTNAYNTAVTQHIALATASIQPENIAKGLSAAMATASGLTGFIVEGQFIYWEASMGIVSTSVEDGGDDTYMRAVVHTVDSIDKLSPNHWGGKVVRIAPKKQSNKDAYYVMAHLKSGGVRGEVTWKETAGEVQTPIEMFAVAWAGLDKLYIGSTPAELNLLSPDAKCPEFKPSTVGDSVSSPLPNFFGKPLSYLGVFQDRLLVATGAVVFASRPGDYFNMFRQSVLVVEDNDPVEMFALGSEDDVISWDTSFDRNHVLFGRKFQYIIPGRVMLSPKNPSIQIMSANEDAVDAEPKNSGNFVFFAKDTAKKGSLHQIQMGATSDSSESYECSQQLDRYIKGKPVQLVCTTAPYNILVRSTDMNNGFYIYSYLDSMQGVDRLFDSWSRWEWAEELGPCCGISKWKGELLVFTVRNHSKGCSLVCDKFTFDTALSSKPHLDSNMPLANLPASGWWSSGEFDSIGSIAYANTHDYFMLGSKIDRVQDNMEWYRDTGHKEHLVIGVDFQAYIEPTSPYMRDRNDKAIVNGRLTLSKLDVAVSDTGGLEATLETANGSSQVAKFEGRVLTRKTNMVGRAPITDTVVGVPVFREIREFKLRISAYSWLPLSITGIEWVGQWFSNIRRV
Physico‐chemical
properties
protein length:849 AA
molecular weight: 93829,91090 Da
isoelectric point:6,22077
aromaticity:0,09776
hydropathy:-0,32002

Domains

Domains [InterPro]
IPR058003
TTP
1–845
IPR058003
DC_0058
STR
1–849
DC_0058
YP_009801220.1
1 849
Architecture
STR
STR 1-849
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009801220.1
1 849
Domain Start End Length (AA) Confidence
N-terminal 1 138 138 0,6744
Central domain 139 337 200 0,3595
C-terminal 338 849 511 0,5392
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-138
Central
139-337
C-terminal
338-849

Taxonomy

  Name Taxonomy ID Lineage
Phage Aeromonas phage 25AhydR2PP
[NCBI] 		2163976 Uroviricota > Caudoviricetes > Autographivirales > Aerosvirus > Aerosvirus av25AhydR2PP
Host Aeromonas hydrophila
[NCBI] 		644 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Aeromonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009801220.1 [NCBI]
Genbank nucleotide accession
NC_047966 [NCBI]
CDS location
range 14700 -> 17249
strand -
CDS
ATGGCAAGAGTAGGTGGTAGTTATGAGTCAGTGGTACGGGGCGTCTCAGAACAGGCCCCACAGGACCGCAGAAGCGGGCAGATGCACGAGCAGGTGAACATGATAAGTGACCCTGTTCGAGGTAATGTCCGCAGGCACGGTAGCGAGTTCCAGGCAGGGTTGCAGATTACCCCTCAGTCGGAGGCTCCAACCCGGGCACAGGTAAACGAATATGCAAAGGGTGCAACAACCCGCACCTATTACTGCGATGGCCGGGAGCTTGAGCTGATTTACCGAAAGGGCCCCAAGGTGGGCAAACTCCCGAACATCCAATGCTACGACAAGACCCAGGGGAAGTTTCTACAGGTTATCATGGGCGGCGGCGGTGTTTGCGCTGACATTGACCAACAAGGGGTATCCGGTCTGGTTAATATTGGTAAGTTCGCATTCATAAGCGGGGCAACCTTTAAACCAACCTGGACAATCAACAAGAACCTGCCAGGGCAGGACGAGAACAACTCAGGTGTAATCTGGGTTCGTCAAGGTGCATTCTCCAGGACCTACACTGTCCGTATGAAGCTGGCCGATGGCCGCACAGTTGTTGCGGAACACAAGACAATGCCGGCAACCTATGAGGGTAAGCTGGACACCAGTGATATTGTGTGGGACAAAGATGACCCTGGGAAGTACACGAAGGCGGTTACAGACCGGACCAATGCGTACAATACAGCTGTAACCCAGCACATCGCTCTGGCCACTGCAAGCATACAGCCGGAGAACATCGCAAAGGGACTGTCAGCAGCTATGGCAACTGCCTCAGGCCTAACCGGGTTCATAGTAGAGGGGCAGTTCATCTACTGGGAAGCGTCCATGGGGATTGTAAGCACATCCGTAGAGGACGGTGGCGACGACACCTACATGCGGGCAGTTGTCCACACTGTAGACTCCATAGACAAACTATCTCCGAATCACTGGGGTGGTAAGGTGGTTCGGATAGCACCGAAGAAGCAGTCGAACAAGGACGCCTACTACGTTATGGCCCATCTGAAGTCTGGTGGTGTCCGTGGAGAGGTGACGTGGAAGGAAACAGCCGGAGAGGTGCAGACGCCAATTGAGATGTTTGCGGTTGCCTGGGCCGGACTCGATAAGCTCTACATCGGCTCCACCCCTGCTGAATTGAACCTACTGTCCCCTGACGCCAAGTGCCCGGAGTTCAAACCGAGCACAGTTGGCGACAGCGTGAGCAGCCCCCTGCCAAACTTCTTTGGTAAGCCACTGAGTTACCTTGGTGTGTTCCAGGACAGGCTCCTGGTGGCAACTGGGGCCGTTGTGTTCGCTTCCAGACCTGGGGACTACTTCAACATGTTCCGCCAGTCGGTTCTTGTGGTAGAGGACAATGACCCGGTGGAGATGTTCGCACTCGGTTCTGAGGATGACGTGATTAGCTGGGACACAAGCTTCGACCGCAACCATGTGTTGTTCGGGCGCAAGTTCCAGTACATCATCCCAGGTCGGGTAATGCTCTCGCCGAAGAACCCATCAATCCAGATAATGTCTGCGAATGAGGATGCAGTAGATGCAGAGCCAAAGAACAGTGGGAACTTCGTGTTCTTCGCCAAGGACACTGCCAAGAAGGGTTCGCTACATCAAATCCAGATGGGCGCAACCTCGGATAGCTCAGAGTCCTACGAGTGCAGCCAGCAACTGGACAGGTACATAAAGGGCAAGCCAGTTCAACTGGTGTGCACCACTGCACCCTACAATATACTCGTTCGCTCCACGGACATGAACAACGGCTTCTACATCTACTCCTACCTGGATTCTATGCAAGGTGTAGACAGACTGTTTGACAGCTGGAGTCGTTGGGAGTGGGCAGAGGAACTAGGTCCGTGCTGTGGGATTTCAAAGTGGAAGGGAGAGTTGCTGGTATTCACTGTGCGGAATCACTCGAAAGGGTGCAGCCTAGTATGTGATAAGTTCACATTTGACACAGCACTAAGCAGCAAGCCACACCTGGACAGCAACATGCCACTTGCTAATTTGCCTGCATCTGGGTGGTGGTCGTCGGGTGAATTCGACAGCATAGGCAGCATAGCCTACGCAAACACTCATGACTATTTCATGCTTGGCTCTAAGATTGACAGAGTGCAGGACAACATGGAGTGGTATAGGGATACCGGGCATAAAGAACACCTCGTTATAGGGGTGGACTTCCAGGCTTACATAGAGCCCACCAGCCCGTATATGCGGGACCGTAACGACAAGGCGATAGTAAATGGCAGGCTTACACTGTCAAAGCTGGATGTAGCCGTGTCCGATACAGGTGGCCTTGAGGCTACGCTGGAGACAGCAAACGGAAGTTCCCAGGTGGCTAAGTTCGAGGGCCGGGTACTGACCCGGAAGACTAACATGGTAGGCAGGGCCCCTATAACAGACACGGTTGTGGGTGTTCCGGTCTTCCGTGAGATTCGTGAATTCAAACTCCGCATCTCGGCCTATAGTTGGCTGCCACTGAGCATTACCGGCATCGAATGGGTCGGGCAGTGGTTCAGCAACATTCGGAGGGTTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
7c298f512f19eb4910dd1d2e5133dc7e412389996163ffe8a4e2d167da7f488c
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8467
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequences of new Aeromonas and Pseudomonas phages promising in phage therapy dedicated to aquaculture Kolsut,J., Wojcik,E., Wojtasik,A. and Dastych,J. 2005-10-01 — GenBank