Protein

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Genbank accession
YP_008240274.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,88
Protein sequence
MPKKTAPNQGLPYGWIRGEDYWGGPMSDSQIFLDTTLFLTLESLTFSAPPPDVVDGATYVVAANPTGAWAGHEGDVAVYVEKVWTFYKPRYGWRARVRSYEKFLWFNGTTWLDEATGEDPVNPDPDPSVKPKWYDIGVTVSDSMYANEPVVHLPILDPMYLPANMVGSQFDMADGASPAYYQFRVQRNGQNVATMTVEIGNFNASFTTAGGNPISFAAGDRMTVRAQQEAVAGMKNFGFVIRMGLV
Physico‐chemical
properties
protein length:246 AA
molecular weight: 27162,28640 Da
isoelectric point:4,74460
aromaticity:0,13415
hydropathy:-0,23821

Domains

Domains [InterPro]
DC_0494
STR
1–245
DC_0494
IPR021251
STR
32–111
IPR021251
YP_008240274.1
1 246
Architecture
STR
STR 1-245 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage iEPS5
[NCBI] 		2991860 Uroviricota > Caudoviricetes > Casjensviridae > Chivirus iEPS5 >
Host Salmonella typhimurium
[NCBI] 		90371 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_008240274.1 [NCBI]
Genbank nucleotide accession
NC_021783.1 [NCBI]
CDS location
range 25343 -> 26083
strand -
CDS
ATGCCGAAAAAGACAGCCCCGAATCAGGGGCTACCCTACGGGTGGATTCGCGGGGAAGACTATTGGGGTGGCCCGATGTCCGACTCGCAAATCTTCCTCGACACCACGCTATTCCTGACACTGGAATCGCTGACCTTCTCCGCTCCGCCGCCGGACGTGGTGGACGGGGCCACCTACGTCGTCGCGGCTAACCCGACGGGGGCGTGGGCCGGACATGAAGGCGATGTGGCCGTGTACGTGGAAAAGGTCTGGACGTTTTACAAGCCTCGTTACGGATGGCGCGCTCGCGTCCGTTCGTACGAGAAATTCTTGTGGTTTAACGGCACGACGTGGCTTGACGAGGCGACCGGGGAAGACCCGGTCAACCCTGACCCCGACCCAAGCGTTAAGCCGAAATGGTACGACATCGGCGTGACAGTGTCGGACAGCATGTACGCGAATGAACCCGTCGTGCATCTGCCGATCCTTGACCCGATGTATCTGCCTGCCAATATGGTTGGCTCACAGTTCGACATGGCCGACGGCGCAAGCCCGGCCTATTACCAATTCCGCGTGCAGCGCAACGGCCAGAACGTCGCAACGATGACCGTGGAAATCGGAAACTTCAACGCATCGTTTACCACTGCCGGGGGCAACCCGATTTCCTTCGCCGCCGGGGATCGCATGACGGTTCGCGCGCAGCAGGAAGCCGTCGCCGGGATGAAAAACTTTGGCTTCGTAATTCGCATGGGACTGGTCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
06e8ec020c6dd6bc317f2ef873adf5670ea12c0e9a6a146fdaf5a137c29b7aa4
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8736
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Identification and Characterization of a Novel Flagellum-Dependent Salmonella-Infecting Bacteriophage, iEPS5 Choi,Y., Shin,H., Lee,J.H. and Ryu,S. 2013 23747700 GenBank