Protein

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Genbank accession
QBX26227.1 [GenBank]
Protein name
YOMR protein
RBP type
TF
Evidence RBPdetect2
Probability 0,95
Protein sequence
MGYFIQPIVTDKAISETALAIQNQEPLVFTRIALGSGRHQTDGGKKNDVAQIVHSLQVTQSLSTDISDTIRLTARLDNSRIEREMIVNEIGVFAKCGNHEEFMYMYTWAEQGDVIPPKTSAYVYRDYDFNTTISKNSQITIQYNATDLVYATVPELKETERKLQTNIDNHIGDTARHVSDQERTRWNGKADSSHRHKVADIDGLEAIIGNQTTNKANQADLTAHIQNKNNPHGVTKQQVGLGNVTNVEQASKSDFQHHLDNHNNPHSVTKAQVGLENVTNVEQASKQEFNAHATNHNNPHNVTKQQVGLGDVDNIRQASYESVEALKREFQEHEDRLNAIEYMFLQNDFTAPIRTEDGTEHTLLADENGRVIVADWKYRMEV
Physico‐chemical
properties
protein length:382 AA
molecular weight: 43098,98840 Da
isoelectric point:5,54177
aromaticity:0,06283
hydropathy:-0,73613

Domains

Domains [InterPro]
DC_0708
STR
44–255
DC_0708 DC_0782
DC_0031
STR
252–291
DC_0031 Coil
QBX26227.1
1 382
Architecture
STR
STR 44-378 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Streptococcus phage Javan308
[NCBI] 		2548100 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Streptococcus mitis B6
[NCBI] 		365659 Bacillota > Bacilli > Lactobacillales > Streptococcaceae > Streptococcus > Streptococcus mitis

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QBX26227.1 [NCBI]
Genbank nucleotide accession
MK448902 [NCBI]
CDS location
range 36172 -> 37320
strand +
CDS
ATGGGATATTTTATCCAGCCTATTGTGACTGATAAAGCAATCAGCGAAACGGCCCTAGCAATTCAAAATCAAGAACCATTGGTCTTTACTCGTATTGCTTTGGGTAGTGGCCGACATCAGACAGACGGAGGCAAGAAGAATGATGTAGCTCAAATAGTTCATTCTTTGCAAGTTACGCAGTCTTTATCTACTGATATTTCGGATACGATTCGTCTTACAGCTCGGTTAGATAATTCACGGATTGAGCGTGAAATGATTGTCAATGAAATCGGTGTGTTTGCAAAATGTGGGAATCATGAAGAGTTCATGTACATGTACACTTGGGCAGAACAGGGGGATGTGATTCCTCCCAAAACATCTGCATATGTGTATCGAGATTACGATTTCAATACAACTATCAGCAAGAATAGTCAGATTACCATTCAATACAATGCGACTGACTTGGTCTATGCGACTGTTCCTGAACTGAAGGAGACAGAAAGAAAGCTACAAACCAATATCGATAATCATATTGGAGACACTGCCCGTCACGTTTCTGACCAAGAGCGGACACGCTGGAATGGGAAAGCCGATTCAAGCCACAGGCACAAGGTTGCAGACATCGACGGCCTTGAAGCGATTATCGGCAACCAAACAACAAATAAAGCGAATCAAGCAGACCTTACTGCTCACATCCAAAACAAAAATAACCCACACGGTGTCACTAAGCAACAAGTGGGACTAGGGAATGTTACGAATGTTGAGCAAGCCAGTAAGTCTGATTTTCAACATCACTTAGACAATCATAATAACCCTCATAGCGTCACAAAGGCGCAGGTAGGTTTGGAAAATGTGACGAATGTGGAACAGGCTAGTAAGCAGGAGTTCAATGCTCACGCTACTAATCACAACAATCCGCATAATGTCACTAAGCAACAGGTTGGGCTTGGTGACGTAGATAACATCAGACAAGCAAGCTATGAGTCTGTAGAGGCTTTGAAGCGTGAGTTCCAGGAGCACGAAGATAGACTAAATGCTATCGAGTATATGTTCTTACAGAACGACTTCACTGCTCCGATTCGTACAGAAGATGGTACAGAACATACCCTACTTGCGGATGAAAATGGTCGTGTAATTGTCGCCGATTGGAAATATAGAATGGAGGTATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
1b3cd724f6af4e3dfa93c42ceaade7afc2bc3ebb76c3f76b4c2459e13baa0a10
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8303
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Prophages and satellite prophages are widespread among Streptococcus species and may play a role in pneumococcal pathogenesis Rezaei Javan,R., Ramos-Sevillano,E., Akter,A., Brown,J. and Brueggemann,A.B. 2018-12-20 — GenBank