Protein

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Genbank accession
APD19509.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 0,99
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,73
Protein sequence
MADYSQLPIENIWSTGGDMVAPTPAQQQGGWGIQSVPRQWWNWKWNLHDTNLAYLLQKGIPEWTSTQEYIANKSFCTRNGFVYKAVRTHTGSDPATVSSNWVRAFADFTTASSALGSLTPREGGIPFFISASGAGVFDSTAYGRGMLNVANAAGARNYISAQESSVVLSNLSTVTRAANAVPYFNTDTSMATFNITAFGRGLVNAGDATNARTFLGLANSATITADPANRAHTLVYRDAAGNFNAGVITATLSGNATTASKLRAPVTINGVAFDGSQNIVLPGLDTSYAGVVARLHINGANMTGTDKTTQLALRNKSDTDWISLVTPDDSSVVFQFRGPEADNASVRINSNVVFHAGNQYGLGATQTQARERLLVDRLAQNTSQTVLYNADRSRYFWLQDNGVSGIWDAATNTPLWRFSGLGQLDFGTVPVARITGLANSATIPASVSNQTNQIVVRSGTGDISVQGITAYGPVLGTESVSVRAGTGNAHLTFQRNNGTEVALIWGIPSANSLNFRTAGGATGMSLAGQDLTVVGRVNAATLNSSGNVNSSGNVIAAGNVQASNRVYCGTAFMGSNGNITGGAFGSYGTLTNWVDSVYARKTDVMTDAQILAATSRGSAQAVGTYVFAIAASGSGDVGTVVAGTSLRSSSPVNYHGTTLSGSYRCMGRFGAGGSNQITLFQKVAA
Physico‐chemical
properties
protein length:685 AA
molecular weight: 71622,55940 Da
isoelectric point:9,11997
aromaticity:0,08613
hydropathy:-0,07883

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
APD19509.1
1 685
Domain Start End Length (AA) Confidence
N-terminal 1 313 313 0,5749
Central domain 314 512 200 0,2167
C-terminal 513 685 172 0,8342
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-313
Central
314-512
C-terminal
513-685

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage Zigelbrucke
[NCBI] 		1916099 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudomonas aeruginosa PAO1
[NCBI] 		208964 Bacteria > Proteobacteria > Gammaproteobacteria > Pseudomonadales > Pseudomonadaceae > Pseudomonas

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
APD19509.1 [NCBI]
Genbank nucleotide accession
KY073228.1 [NCBI]
CDS location
range 43556 -> 45613
strand +
CDS
ATGGCTGATTACAGTCAACTACCTATTGAAAATATTTGGTCCACAGGCGGGGATATGGTAGCCCCGACCCCTGCGCAGCAGCAAGGCGGATGGGGTATTCAGTCGGTTCCTCGCCAATGGTGGAACTGGAAGTGGAACCTTCACGATACTAACCTAGCGTATTTGCTACAGAAGGGCATCCCAGAGTGGACCAGCACTCAAGAGTATATTGCAAACAAATCGTTCTGCACAAGAAACGGTTTCGTCTACAAGGCTGTCCGTACCCATACAGGTAGCGACCCGGCCACCGTTAGTTCTAACTGGGTCCGAGCTTTCGCAGACTTTACCACAGCTAGCTCTGCACTTGGAAGCCTGACTCCGAGAGAAGGAGGGATTCCTTTCTTCATTAGCGCATCTGGTGCAGGTGTGTTTGACTCTACGGCTTATGGACGTGGCATGCTGAACGTAGCCAACGCAGCGGGAGCTAGAAACTACATTTCGGCTCAAGAGAGTTCTGTTGTCCTGTCTAACCTGTCTACTGTGACTAGGGCTGCCAACGCGGTTCCGTACTTCAACACCGACACCTCGATGGCTACCTTCAACATTACAGCGTTCGGAAGAGGCCTAGTCAACGCGGGTGATGCAACTAACGCAAGAACCTTCCTAGGCCTAGCTAACTCTGCTACTATCACGGCTGATCCAGCCAACAGAGCACACACTCTGGTCTATAGAGACGCTGCTGGTAACTTCAACGCTGGTGTGATTACAGCCACTCTTTCTGGTAACGCGACTACAGCCAGCAAGCTCAGGGCTCCAGTTACGATTAACGGCGTAGCGTTCGACGGAAGCCAGAACATTGTTCTGCCGGGCCTAGATACAAGCTACGCCGGGGTTGTAGCGAGGCTCCATATTAATGGAGCTAACATGACCGGAACAGATAAGACTACCCAGCTAGCTCTTAGAAATAAATCCGATACAGATTGGATTAGCTTGGTTACTCCTGATGATAGCTCGGTGGTGTTTCAATTCAGAGGCCCAGAAGCGGATAATGCCTCTGTGCGGATTAACTCTAATGTCGTATTCCACGCGGGGAACCAGTACGGACTAGGAGCTACTCAAACGCAAGCCAGAGAGCGGCTCTTGGTTGACAGACTGGCACAGAACACGTCTCAAACTGTCCTGTACAACGCGGATAGGAGCAGGTATTTCTGGTTGCAAGATAACGGTGTCTCCGGTATCTGGGACGCAGCGACTAATACTCCTTTGTGGCGTTTTTCTGGGCTAGGTCAGCTTGACTTCGGAACTGTTCCTGTTGCACGAATTACAGGACTGGCCAACTCTGCAACAATCCCTGCATCTGTGTCCAATCAGACTAACCAGATTGTTGTAAGGAGTGGCACAGGCGATATCTCAGTACAAGGTATCACTGCTTACGGGCCTGTACTAGGCACAGAGTCCGTCAGCGTAAGGGCTGGAACTGGTAATGCCCATTTAACGTTCCAAAGGAACAATGGAACCGAGGTAGCTCTTATTTGGGGAATCCCGTCCGCCAACTCCTTGAACTTCAGGACAGCAGGTGGAGCTACGGGTATGTCTCTAGCAGGACAAGACCTCACCGTAGTTGGCAGGGTAAATGCCGCAACACTTAACTCATCTGGTAACGTTAACTCCAGTGGAAACGTGATTGCTGCTGGGAACGTACAGGCTAGCAATCGTGTGTACTGCGGTACTGCTTTTATGGGCAGCAACGGCAACATTACTGGTGGAGCTTTCGGCTCTTATGGGACTCTTACCAACTGGGTAGACTCCGTATATGCTAGAAAGACAGATGTAATGACTGACGCCCAAATCTTGGCTGCCACTTCTAGAGGTAGTGCTCAGGCTGTTGGAACATACGTCTTTGCGATTGCAGCTAGCGGGAGCGGGGATGTTGGGACTGTAGTAGCTGGTACGTCTCTAAGGTCTTCGTCTCCCGTCAACTACCACGGAACTACGCTATCCGGTAGCTACAGGTGCATGGGTAGGTTCGGAGCCGGAGGTTCTAACCAGATTACCTTGTTCCAGAAGGTTGCAGCTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
ef663587de2a1e8b5dcaf9cc8296febcb73383f6f12cfc219f3c841a82860633
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6343
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50