Protein

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Genbank accession
QPB07814.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence RBPdetect
Probability 0,83
Protein sequence
MSYFNNVYTLKLDIKQQNPNPVIRIVQYDSAVFKIELYDNGRKIDIKDGERFTVSVEHEATGETHSGIAKYDGEQFVVYDLRKADMKNIGTYRARFASYKDRNRVSSLMFRYEVYEDYETVGDASELTMLQELFQEVEEVGRVTQRQGEYAEDRGDYANAAGDYANRAGDSQIMNWLPYVKTLAERNKLYPNPENGDTVYVIDENKVFRYDGIDALDWEAISGYDTSVIQDIYNTKEDKTVVAKLREDLNSLTIGARNLLTGTDFEKPMNLKYTSPTFTFTQNKSDSSMTLAPTDKYVSTSAVYFDLEKEALENNFFTLSFNVKVLSGSATLKFKVGDAAYSEPVTVKASSNYQRVVLTASTQDLKTNKTNLLLQTTSAIAIEKESFKAEIGNRATTWTPSYLDVKTKLDDYGTRIKGLEVEMNTNVVKKSVYEADKSKNEEKLSKIIQDANSLTSIVSKKVDKGQVKSMINQTAERIKIKASNIDFDGVVVFKNRNNKIDPNAFVRINGGELTAKGYYRRVWRDGKARNRVQVVQLTDGMLRISDPKGDLVDSTKDRDYRYDIDVNGKKVYSTVRSLYYSSDGVSTYRDGSGKAFNKEGKVVSSGTIEFFSHEYSRSRGLTLYSAGGTIGLQAANNAIHIDAAATLYNRSRQANVIIRPHENVRKGINDFKFGISADNTGRLVYGDESKRLGVGLRFSKSSKNKVITGIDSTGRASSDVRLEIGEVRANKILSRDGKETVYFNNAGSGNLTQSATLRAGGIKTNATNFYVGVRGELRVTNTRGANFGKGIGYMPVRASKFNSVSSRKYKTNIKDLEINSLDVLNSTDIKQYNLKSDLNDGIDKVKYGVILEDSHDALKEGDAIDVYTMTSILWDVVKKQQKEIEQLKK
Physico‐chemical
properties
protein length:889 AA
molecular weight: 99734,58260 Da
isoelectric point:8,93817
aromaticity:0,09224
hydropathy:-0,58740

Domains

Domains [InterPro]
DC_1023
STR
7–886
DC_1023
IPR030392
CHP
805–889
IPR030392
IPR030392
CHP
805–860
IPR030392
QPB07814.1
1 889
Architecture
STR
STR 7-889
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QPB07814.1
1 889
Domain Start End Length (AA) Confidence
N-terminal 1 267 267 0,9958
Central domain 268 508 242 0,2869
C-terminal 509 889 380 0,6694
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-267
Central
268-508
C-terminal
509-889

Taxonomy

  Name Taxonomy ID Lineage
Phage Staphylococcus phage PhiSepi-HH3
[NCBI] 		2782522 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Staphylococcus epidermidis
[NCBI] 		1282 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QPB07814.1 [NCBI]
Genbank nucleotide accession
MT880872 [NCBI]
CDS location
range 120098 -> 122767
strand +
CDS
TTGTCATATTTTAATAATGTCTATACGTTAAAATTAGATATCAAGCAACAAAACCCTAACCCAGTAATTCGTATTGTTCAATATGACTCAGCTGTTTTTAAAATAGAGTTATATGATAATGGACGAAAAATAGATATCAAAGATGGCGAGAGATTTACGGTTAGTGTAGAACATGAGGCTACTGGTGAAACTCATTCTGGTATCGCTAAATACGATGGTGAACAATTTGTTGTTTATGATTTAAGAAAAGCTGATATGAAAAATATTGGTACATATAGAGCAAGATTTGCCTCTTATAAAGATAGAAACCGTGTTTCTTCACTAATGTTCAGATATGAAGTTTATGAAGATTATGAAACTGTTGGAGACGCTAGTGAATTAACTATGCTCCAAGAACTATTCCAAGAAGTTGAAGAAGTTGGAAGAGTTACACAACGTCAAGGTGAATATGCTGAGGATCGTGGAGATTATGCTAATGCAGCTGGTGACTATGCAAACCGTGCTGGAGACTCTCAGATTATGAATTGGCTACCTTACGTTAAGACCTTAGCTGAAAGAAATAAACTATATCCAAACCCGGAAAACGGCGATACTGTTTATGTTATTGATGAAAATAAAGTATTCAGGTATGACGGAATTGACGCATTAGACTGGGAAGCAATTTCTGGATATGACACTTCAGTTATTCAAGACATTTATAATACTAAAGAAGATAAAACAGTTGTTGCTAAATTAAGAGAAGATTTAAATTCATTAACTATTGGTGCTAGAAACTTACTCACAGGTACAGATTTCGAAAAACCTATGAATTTAAAATATACCTCACCTACCTTTACTTTCACTCAAAATAAATCAGACTCATCTATGACATTAGCCCCTACTGATAAATACGTTTCAACTTCTGCTGTATACTTTGATTTAGAAAAAGAAGCTCTCGAAAATAATTTCTTTACCCTTTCATTTAACGTAAAAGTATTAAGTGGTAGTGCTACACTCAAGTTTAAAGTTGGTGACGCTGCTTATTCTGAGCCTGTTACTGTAAAAGCTTCATCTAATTACCAACGTGTAGTATTAACTGCTTCAACTCAAGATTTAAAAACGAATAAAACTAACCTTTTATTGCAAACTACAAGTGCTATTGCCATTGAAAAAGAAAGCTTTAAAGCAGAAATCGGTAATAGAGCAACTACTTGGACACCTTCTTATCTAGATGTAAAAACAAAACTGGATGACTATGGTACTAGAATTAAAGGTTTAGAAGTTGAAATGAACACAAACGTAGTTAAGAAATCGGTCTATGAAGCTGATAAATCTAAAAATGAAGAGAAGCTCAGTAAGATTATACAAGACGCTAATAGTTTAACATCTATCGTTTCTAAGAAAGTTGATAAAGGTCAAGTTAAATCTATGATCAACCAAACTGCTGAACGTATCAAAATTAAAGCAAGTAATATTGATTTTGATGGAGTAGTTGTATTCAAAAACAGAAACAATAAGATTGATCCTAACGCTTTTGTAAGAATTAACGGTGGAGAATTAACTGCTAAAGGTTACTACCGAAGAGTATGGCGTGATGGTAAAGCTCGTAACCGTGTTCAAGTTGTTCAACTTACAGACGGAATGCTAAGAATTTCCGATCCAAAAGGTGACTTAGTTGACTCAACAAAAGATAGAGACTATCGCTATGATATTGATGTTAATGGTAAGAAAGTTTATAGTACAGTTCGTTCTCTTTACTATTCTTCAGATGGTGTCTCTACTTACCGTGACGGTTCTGGTAAAGCATTTAATAAAGAAGGTAAAGTAGTTTCTTCTGGTACTATCGAATTCTTCTCACATGAATATTCTAGAAGTCGTGGTTTAACATTATATTCTGCTGGTGGTACAATTGGTTTACAAGCAGCTAACAATGCTATTCATATTGACGCAGCGGCTACTTTATATAATCGTTCAAGACAAGCTAATGTAATAATTCGACCTCATGAGAACGTTCGTAAAGGTATCAACGACTTCAAATTTGGTATTAGTGCTGATAATACAGGTAGACTTGTTTATGGTGATGAAAGTAAACGTTTAGGTGTAGGACTTAGATTTTCTAAATCATCTAAAAACAAAGTAATTACAGGTATTGACTCAACTGGACGTGCTAGTTCAGATGTACGTTTGGAAATTGGTGAAGTAAGAGCTAACAAAATTTTATCAAGAGATGGTAAGGAAACAGTTTACTTCAACAATGCTGGTAGTGGTAACTTAACTCAATCAGCTACTTTACGTGCTGGCGGTATCAAAACTAATGCAACTAACTTCTATGTTGGTGTACGTGGTGAACTACGTGTTACTAATACTAGAGGTGCTAACTTTGGTAAAGGTATTGGTTACATGCCTGTAAGAGCAAGTAAATTTAACTCTGTATCTAGTAGAAAATATAAAACAAATATTAAAGATTTAGAAATTAATTCTTTAGATGTTTTGAATTCTACTGATATTAAACAATACAATCTTAAATCTGATTTAAATGACGGTATCGACAAAGTTAAATATGGTGTGATCCTTGAAGACTCTCATGACGCTTTAAAAGAAGGAGACGCAATTGACGTTTATACTATGACTTCTATCCTTTGGGATGTTGTTAAAAAGCAACAAAAAGAAATCGAGCAATTGAAAAAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
c0ce1f529b2ba6091f2134c3f353f364f16e9946f74ca7aa2b8daf0cbcb47c55
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,3077
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50