Protein

View in Explore
Genbank accession
XQW42367.1 [GenBank]
Protein name
colanic acid degradation protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MADLLPTVKIADLPTTTQLFEGDFLVVDQSDATRKATWSSALAAFDTMRMFSFQDGGTLISAKDQVIDRSNNKVYQWNGSYPKLVPANSSPATTGGIGPNGWSVNDPALRGDLSGQGGSALIGGPAGTVAQSLSGYVTPDQFVGKYSSTTEAVTAMVAYAKANKKAVLAWGWELTLETSVYIDGVEWYGGAFNQSGGNRYMYLSNSTFRWVTFTGVCTRHYGGRLIITDSEWVNNTNTAAMLIQALPVEGTIDILDSNFRGCKYGILQQGTGALITRARFARLNFNDLTGDAIECNVVNRHYKAGGLTIEDINIDNINNTDGSPNWGIGIGVAGQGPYGANASDDQYVSGIIIRNVKMRRVRQCIHFELCRDFKVENVEVYPDASVSNGTLLASGGVVCYGSKDFIIDGVRGEMVNGATRFLYFGWGVNAGVYAAPCRDFTLRNVRTHTGLVDIPVSAMDDWTNTVTVEDVECDVFKYRGLVSRLRLADIRCNKFDGIGDYEAGQGEAGGAMKRWTWCSAEILNINSLDANGVANGSFGQVGFDHLTTYGCNFDVVQHSKTNGNRGVTLLNAGNIYIADNDLFPQGKEFVKGDIILKKTGGMFVVETGGSYIEPNDYIKATVVGSRTLQCAADSGVTQPWANRAFKSAGLQLTIPGAGPNGTDLKTTVVRAPYQNGAWTTPFYLDILDPIQTATPDNTALVSTNPVVYSTRT
Physico‐chemical
properties
protein length:712 AA
molecular weight: 76744,17400 Da
isoelectric point:5,23416
aromaticity:0,09831
hydropathy:-0,15028

Domains

Domains [InterPro]
DC_1348
ATT
3–360
DC_1348 DC_0045
G3DSA:2.10.10.80
ATT
47–115
G3DSA:2.10.10.80 IPR011050
IPR040775
RBD
52–102
IPR040775
XQW42367.1
1 712
Architecture
ATT
STR
RBD
ATT 3-360 | STR 361-447 | RBD 448-712
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XQW42367.1
1 712
Domain Start End Length (AA) Confidence
N-terminal 1 147 147 0,9916
Central domain 148 581 435 0,9940
C-terminal 582 712 130 0,9260
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-147
Central
148-581
C-terminal
582-712

Taxonomy

  Name Taxonomy ID Lineage
Phage Enterobacter phage FENT2
[NCBI] 		3403059 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Enterobacter kobei
[NCBI] 		208224 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XQW42367.1 [NCBI]
Genbank nucleotide accession
PQ882504 [NCBI]
CDS location
range 44706 -> 46844
strand -
CDS
ATGGCAGACCTATTACCTACAGTCAAGATCGCGGATCTCCCGACTACAACTCAACTCTTCGAGGGAGATTTTCTCGTTGTTGACCAGTCTGATGCAACAAGGAAGGCCACCTGGTCTTCCGCCTTGGCAGCATTTGACACGATGAGAATGTTTTCTTTCCAAGATGGTGGGACACTAATCTCCGCGAAAGACCAAGTTATTGACCGCTCAAACAACAAGGTGTACCAGTGGAATGGTTCATATCCAAAACTTGTTCCGGCAAACTCCTCCCCTGCAACCACAGGCGGCATTGGTCCTAATGGATGGTCGGTTAACGATCCGGCTCTCCGTGGGGATCTCTCAGGGCAAGGGGGTTCTGCCCTGATTGGTGGTCCGGCAGGTACGGTAGCCCAATCCCTGTCTGGGTATGTAACACCAGACCAGTTTGTTGGTAAGTATTCTAGCACAACAGAAGCTGTCACTGCAATGGTTGCTTATGCTAAAGCTAACAAAAAAGCTGTTCTTGCGTGGGGATGGGAACTTACCCTTGAGACGAGCGTTTACATCGACGGCGTAGAATGGTACGGCGGTGCATTCAATCAGTCTGGTGGTAACCGATACATGTATCTGTCTAACAGTACGTTCCGCTGGGTAACTTTCACAGGAGTTTGTACCAGACACTATGGTGGCAGACTTATCATCACGGATTCAGAGTGGGTCAATAACACCAATACCGCAGCGATGCTTATTCAGGCCCTGCCTGTAGAAGGTACGATTGACATTCTGGACAGTAACTTCCGTGGATGTAAGTACGGTATCCTCCAGCAAGGTACAGGTGCTCTTATTACCCGTGCTCGTTTTGCTAGACTTAACTTCAATGATTTGACAGGCGATGCTATTGAGTGTAACGTTGTTAACCGTCACTACAAAGCGGGTGGTCTGACAATTGAGGATATTAACATTGACAATATCAACAACACAGACGGATCTCCTAACTGGGGTATCGGTATCGGTGTTGCAGGTCAGGGTCCATACGGAGCTAACGCCTCAGATGACCAGTATGTCAGTGGTATTATCATTCGAAATGTAAAAATGCGTCGTGTACGTCAGTGTATCCACTTCGAACTTTGCCGAGATTTCAAGGTAGAGAACGTAGAGGTTTATCCGGACGCTTCCGTATCCAACGGTACACTTCTGGCATCTGGTGGTGTTGTTTGTTACGGGTCTAAGGACTTCATCATTGATGGTGTTCGAGGCGAGATGGTCAACGGAGCAACGCGCTTCCTGTATTTCGGTTGGGGTGTTAACGCCGGAGTATATGCTGCTCCATGTCGTGACTTCACACTGAGAAACGTTCGTACACACACCGGATTGGTTGACATTCCTGTAAGTGCTATGGATGACTGGACAAACACTGTAACGGTTGAAGATGTGGAGTGTGATGTCTTTAAATACCGTGGTCTTGTTTCTCGTCTGCGTTTAGCTGATATCCGTTGTAACAAGTTTGACGGTATCGGTGACTACGAAGCGGGACAAGGTGAAGCTGGCGGGGCTATGAAACGCTGGACTTGGTGTTCTGCTGAGATCCTGAATATCAACAGCCTTGATGCAAACGGTGTTGCTAATGGTAGTTTTGGTCAGGTTGGTTTTGATCATCTTACCACGTATGGTTGCAACTTCGACGTTGTGCAACACTCTAAGACCAACGGTAACCGTGGTGTTACTCTCCTGAATGCGGGTAATATTTATATTGCCGATAACGACCTTTTCCCACAAGGTAAAGAGTTCGTGAAAGGAGATATCATCCTGAAGAAAACAGGTGGTATGTTTGTTGTCGAGACAGGGGGATCTTACATCGAGCCAAATGATTATATCAAGGCTACGGTTGTCGGGTCGCGAACACTTCAGTGTGCTGCCGATTCTGGAGTAACACAGCCTTGGGCCAACAGAGCATTCAAATCTGCGGGTCTACAGCTTACAATTCCAGGAGCGGGTCCAAATGGTACAGATCTTAAGACTACGGTCGTAAGAGCGCCGTATCAAAATGGAGCATGGACGACACCATTCTACTTGGATATTCTGGACCCAATCCAGACTGCTACACCGGACAATACGGCACTTGTGTCTACTAATCCTGTAGTATACAGTACGAGAACGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
4fcb9bc45135929b096e051015cb5c586f28ab66f9f2ebc884ba8a1ce4d5513a
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7335
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A Novel Bacteriophage Targeting mcr-9 Enterobacter kobei with Potential Application in Fresh Leafy Greens Pintor-Cora,A., Carpintero,A., Alegria,A., Giannis,A., Lopez-Diaz,T.-M., Santos,J.A. and Rodriguez-Calleja,J.M. 2025 — GenBank