Protein

View in Explore
Genbank accession
QBX26640.1 [GenBank]
Protein name
tail fibers protein
RBP type
TF
Evidence GenBank
Probability 1,00
Protein sequence
MAFLKGRDVISGQEGTAFIHIDGRNEFMFYVKELEATVKKNKEEVRTLNKRGTQSKSTGFKGEGKMTIYGVTSTFKEMMLDYMKNGRDTFFDIQVTNDDATSSIGRQTTILRECNLDEVVMAQLKVEDDFLEEEVNFTFEDVDILEKFNAPKLG
Physico‐chemical
properties
protein length:154 AA
molecular weight: 17593,72080 Da
isoelectric point:4,86544
aromaticity:0,09740
hydropathy:-0,50195

Domains

Domains [InterPro]
IPR038628
STR
3–147
IPR038628
IPR018989
TAS
4–146
IPR018989
SSF69279
STR
7–148
SSF69279
Coil
Unmapped
31–51
Coil
QBX26640.1
1 154
Architecture
STR
STR 3-148 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Streptococcus phage Javan336
[NCBI] 		2548112 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Streptococcus mitis
[NCBI] 		28037 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Lactobacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QBX26640.1 [NCBI]
Genbank nucleotide accession
MK448910.1 [NCBI]
CDS location
range 28636 -> 29100
strand +
CDS
ATGGCTTTTTTAAAAGGTCGTGACGTAATCAGCGGTCAGGAAGGTACCGCTTTTATTCACATCGACGGTAGAAATGAGTTCATGTTCTATGTAAAGGAACTTGAAGCGACAGTTAAGAAAAACAAAGAAGAAGTCCGCACCCTTAACAAACGTGGTACGCAATCAAAATCGACTGGTTTCAAGGGAGAAGGTAAGATGACCATCTACGGTGTCACTTCAACATTCAAGGAAATGATGTTGGACTACATGAAGAATGGTCGTGATACATTCTTTGATATCCAAGTGACTAATGATGATGCGACAAGTTCAATCGGTCGCCAAACAACTATCTTGCGTGAATGTAACCTTGATGAAGTTGTGATGGCTCAACTAAAAGTTGAGGACGATTTCTTGGAAGAAGAAGTCAACTTTACTTTTGAAGATGTGGATATCTTAGAAAAATTTAATGCGCCTAAATTAGGTTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
2b7fa6cf2aa50de657f6bef13b15777fdccadce9f22398e5cfa50e6d8db4f4e1
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6612
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Prophages and satellite prophages are widespread among Streptococcus species and may play a role in pneumococcal pathogenesis Rezaei Javan,R., Ramos-Sevillano,E., Akter,A., Brown,J. and Brueggemann,A.B. 2018-12-20 — GenBank