Protein

View in Explore
Genbank accession
ALO80455.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,86
TSP
Evidence RBPdetect2
Probability 0,94
Protein sequence
MAGTNYIGPYDKGEVILLSNQNNITISGLAIGNSSTYGIRLYNCTNIVIENCYIYNCDSVAISTELGSNITIRNNIFEEISTGVYCQGGSGIQVTDNDVKNVKGPFPRGQLVQFAGVTGANNKINDNSIENISGESYAEDAINLFQTYGTESSPIEIARNYIRGGGPSGTGGGIMTGDNGGSYVEVYDNILVDPGQYGIAISSGQFINIHNNIVYGREQSFTNVGIYAWEQYGKPCSDNRIANNRVHWTNKNGTLNHRWDAGNCGVIADWNTNTWGDITVTEDILPEKILSESSVLKRKYLGENRVFKIAKGDNIKF
Physico‐chemical
properties
protein length:317 AA
molecular weight: 34550,85480 Da
isoelectric point:4,90949
aromaticity:0,09464
hydropathy:-0,35079

Domains

Domains [InterPro]
IPR012334
STR
4–104
IPR012334 IPR012334
IPR011050
STR
11–273
IPR011050
IPR039448
ENZ
16–134
IPR039448 IPR006626 IPR006626 IPR006626 IPR006626
IPR011050
STR
20–273
IPR011050
IPR006626
Unmapped
21–43
IPR006626 IPR006626 IPR006626 IPR006626
ALO80455.1
1 317
Architecture
STR
STR 4-306 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
ALO80455.1
1 317
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,0183
Central domain 11 306 297 0,9990
C-terminal 307 317 10 0,1504
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-306
C-terminal
307-317

Taxonomy

  Name Taxonomy ID Lineage
Phage Cellulophaga phage phi17:2_18
[NCBI] 		1747283 Uroviricota > Caudoviricetes > Lightbulbvirus >
Host Cellulophaga baltica
[NCBI] 		76594 cellular organisms > Bacteria > Pseudomonadati > FCB group > Bacteroidota/Chlorobiota group > Bacteroidota

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ALO80455.1 [NCBI]
Genbank nucleotide accession
KT962247 [NCBI]
CDS location
range 62522 -> 63475
strand -
CDS
ATGGCAGGAACAAATTACATAGGCCCATACGATAAAGGAGAAGTAATTTTACTTTCAAATCAAAACAATATAACAATAAGTGGATTAGCTATAGGAAATTCATCTACTTATGGAATAAGACTGTATAATTGTACTAACATTGTTATTGAAAATTGCTATATATATAATTGCGATAGTGTTGCAATTAGTACAGAATTAGGCAGTAACATAACAATAAGAAATAATATTTTTGAAGAAATATCAACAGGGGTTTATTGTCAAGGAGGTTCTGGTATACAAGTAACGGATAATGATGTTAAAAATGTAAAGGGGCCGTTTCCAAGAGGCCAGTTAGTTCAATTTGCAGGAGTGACAGGAGCTAATAATAAAATTAATGATAATTCTATAGAAAACATATCTGGTGAAAGCTATGCTGAAGATGCCATTAATTTGTTTCAAACATATGGTACAGAATCTAGTCCTATTGAGATAGCTAGGAACTACATAAGAGGAGGAGGTCCAAGTGGTACAGGAGGAGGCATTATGACTGGGGATAACGGAGGCTCTTACGTGGAAGTTTATGATAACATTTTGGTAGATCCTGGACAATATGGTATTGCGATATCAAGTGGTCAATTTATAAATATACATAATAATATTGTTTACGGAAGAGAGCAATCTTTTACAAATGTTGGAATATATGCTTGGGAACAATATGGCAAACCTTGTTCAGATAATAGAATAGCTAATAATAGAGTTCACTGGACAAATAAAAATGGTACTTTAAATCATAGGTGGGATGCTGGAAACTGTGGTGTTATTGCAGATTGGAATACCAACACTTGGGGAGACATAACTGTAACAGAAGATATTTTACCAGAAAAAATACTAAGTGAATCTAGTGTTTTAAAAAGAAAATATTTAGGTGAAAATAGAGTATTTAAAATAGCTAAAGGAGATAATATAAAGTTTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
fd3862d7cb8bc91b8607e83d1798ec209e65323bc5ded2c850509c3d750f42bf
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8047
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Large-scale maps of variable infection efficiencies in aquatic Bacteriodetes phage-host model systems Holmfeldt,K., Solonenko,N., Howard-Varona,C., Moreno,M., Malmstrom,R.R., Blow,M.J. and Sullivan,M.B. 2016-06-27 — GenBank