Protein

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Genbank accession
QCW19155.1 [GenBank]
Protein name
tail fiber protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,91
TF
Evidence RBPdetect2
Probability 0,94
TF
Evidence UniProt/TrEMBL
Probability 1,00
Protein sequence
MAVGEIQISALPQAALPIDLSDIFHLKQGIEDKRCTLEQLLAPHSSLRNNPHGVTKTQIGLDNVINALQLVAANNLSDITNVDEARANLQIMSSEEVNSLVQQHINDKSNPHNTTKAQVGLSNVQNWTTSNLYNEDADKYATARAVNNLYKAVQASYPVGTIHLSMNSANPATYLICGGTWELVSKGRALVGYSDNSRPVGSNFGSSSISLSSNNLPSHSHSIYLTGGGHTHGAAIAIDSFDYGTKGTSSFDYGTKNTNTTGNHSHSVSGSTNVTGNHQHSVGGRYGGDSIGGKQRVQVSGTNQISSVAGDHSHTISGSTNTVGNHYHSVAIGAHNHTVGIGAHTHKGTVTLQSSEHTHSGTTGATGAGQAFSVEQPSFVVYVWQRTA
Physico‐chemical
properties
protein length:388 AA
molecular weight: 40853,15730 Da
isoelectric point:6,65001
aromaticity:0,05412
hydropathy:-0,40129

Domains

Domains [InterPro]
DC_1039
STR
1–388
DC_1039
IPR051934
Unmapped
102–353
IPR051934
IPR053827
ATT
154–265
IPR053827
QCW19155.1
1 388
Architecture
STR
ATT
STR
STR 1-153 | ATT 154-265 | STR 266-388
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QCW19155.1
1 388
Domain Start End Length (AA) Confidence
N-terminal 1 210 210 0,6667
Central domain 211 377 168 0,0919
C-terminal 378 388 10 0,9973
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-210
Central
211-377
C-terminal
378-388

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage DaR-2019a
[NCBI] 		2571168 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QCW19155.1 [NCBI]
Genbank nucleotide accession
MK965969.1 [NCBI]
CDS location
range 19274 -> 20440
strand +
CDS
ATGGCAGTAGGTGAAATTCAAATTAGTGCCTTGCCTCAAGCAGCCTTACCAATTGACCTTAGTGATATCTTCCATCTTAAGCAGGGTATTGAGGATAAGAGATGTACTCTTGAGCAATTACTTGCTCCACACTCAAGCCTAAGAAATAACCCTCACGGTGTTACTAAAACACAAATTGGTTTAGATAACGTTATCAATGCTCTTCAGTTAGTTGCTGCAAATAACTTATCAGATATTACTAATGTTGATGAGGCAAGAGCAAATCTACAGATTATGTCTTCAGAAGAGGTTAATAGCCTTGTTCAACAGCATATTAATGATAAGAGTAACCCACATAACACAACTAAGGCACAGGTTGGTTTAAGTAATGTTCAGAACTGGACAACATCCAACCTTTATAATGAAGATGCAGATAAGTACGCTACAGCAAGAGCAGTAAATAACTTGTACAAGGCTGTTCAGGCTTCTTATCCAGTAGGTACTATCCATCTCTCTATGAACTCTGCTAACCCAGCTACCTACCTAATTTGTGGAGGTACTTGGGAGTTAGTATCAAAAGGGCGAGCATTAGTAGGTTACAGTGATAATTCAAGACCAGTTGGTAGTAACTTTGGTTCTAGTAGCATTAGTTTATCTAGCAACAATTTACCATCACACAGCCATTCTATCTATCTAACTGGTGGTGGGCATACACATGGTGCTGCCATTGCTATTGACAGTTTTGATTATGGCACTAAGGGAACAAGCAGTTTCGACTATGGAACAAAAAACACTAATACTACAGGGAATCACTCACACTCAGTCAGTGGTTCTACCAATGTCACTGGTAACCACCAGCATAGTGTAGGCGGACGTTACGGTGGTGACTCTATCGGTGGTAAACAGCGTGTTCAGGTATCAGGAACAAACCAGATTTCAAGTGTTGCTGGTGACCACTCCCACACTATTAGTGGCTCAACTAATACAGTTGGCAACCACTACCATAGTGTTGCAATTGGTGCTCACAATCATACAGTAGGTATCGGTGCTCACACACATAAAGGTACAGTAACTTTGCAGTCATCTGAGCATACTCACTCGGGTACTACTGGTGCTACTGGTGCTGGTCAAGCATTTAGTGTTGAACAACCATCCTTTGTAGTTTATGTGTGGCAAAGAACCGCTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
28abb0e11e5537d114d7b8bebb7cb780b388997440508bef861473ba7937cd1c
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6999
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Backyard Farms Represent a Source of Wide Host Range Salmonella Phages That Lysed the Most Common Salmonella Serovars Rivera,D., Toledo,V., Pillo,F.D., Duenas,F., Tardone,R., Hamilton-West,C., Vongkamjan,K., Wiedmann,M. and Switt,A.I.M. 2018 29360401 GenBank
Two Phages of the Genera Felixunavirus Subjected to 12 Hour Challenge on Salmonella Infantis Showed Distinct Genotypic and Phenotypic Changes Rivera,D., Hudson,L.K., Denes,T.G., Hamilton-West,C., Pezoa,D. and Moreno-Switt,A.I. 2019 31252667 GenBank