Protein

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Genbank accession
YP_009821378.1 [GenBank]
Protein name
tail fiber protein
RBP type
TSP
Evidence RBPdetect
Probability 0,90
Protein sequence
MLNNLNQPKGSTIGVLKDGRTVQQAIDDTVALPHVSPMWQKVRSAMDDVYIVIMGDSTGNETFEWAYQWATHLAQTVKTHSIRYRLWVDGSGWQGEERMSTGTTERSIFIDNVSVPGSTERYFQGSATGNIFNSGRVYDLVLLNYGHNEGTSVPSITISAGFTEAIFACRQINPMAPIVVTAQNPRRDFPDHSARAVACWADIAGVNGLGVIDVYSAFIKLGSPSELYIDMIHPNAEGHKVWLEVVKKALSDTPAYQFDKVAEPYSGPLRMNLIPNPAFVTWGVDVPALWEANAVTVTQDLTRRESFAYSVKVTCTDVNSPLLYVDLSDTLTASRGQWVTFAARVWRPSGISTNAGRLQISGSGMNTVTSRSKANEAENGWMWAVCHAFVPKGATSLHARFLGGTVVGDSFNVDRVWFGIGKVPSDIDFMGQPVVTLADYYQAENVGVPVGYDTQVSVDGNHIVATPVTSKARFFININYLTPGQTYRVTWSKASPADGYAYARSSGGGLGAVLDTVRLSAGTTSTFVAPSKTCSFVMESDGINPLDVTIASIVKV
Physico‐chemical
properties
protein length:556 AA
molecular weight: 60360,34420 Da
isoelectric point:5,83398
aromaticity:0,09892
hydropathy:-0,06493

Domains

Domains [InterPro]
DC_1550
ATT
1–40
DC_1550 DC_0332 DC_0332
IPR036514
STR
34–252
IPR036514
SSF52266
STR
47–252
SSF52266
IPR051532
Unmapped
50–252
IPR051532
cd00229
ENZ
84–249
cd00229
YP_009821378.1
1 556
Architecture
ATT
STR
STR
ATT 1-40 | STR 41-252 | STR 254-546 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009821378.1
1 556
Domain Start End Length (AA) Confidence
N-terminal 1 46 46 0,6440
Central domain 47 268 223 0,2189
C-terminal 269 556 287 0,9896
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-46
Central
47-268
C-terminal
269-556

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage Pharr
[NCBI] 		2562178 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Klebsiella pneumoniae
[NCBI] 		573 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009821378.1 [NCBI]
Genbank nucleotide accession
NC_048175 [NCBI]
CDS location
range 35339 -> 37009
strand +
CDS
ATGTTAAACAACCTGAACCAGCCGAAAGGCTCAACCATTGGTGTGCTCAAGGATGGGCGCACTGTTCAACAGGCCATTGATGACACGGTGGCCTTACCCCACGTTTCCCCCATGTGGCAGAAGGTTCGAAGCGCAATGGATGATGTGTATATCGTCATCATGGGCGACTCTACAGGGAACGAGACGTTCGAATGGGCGTACCAGTGGGCCACTCACCTTGCACAGACAGTCAAGACCCACTCCATTCGATATCGCTTATGGGTAGATGGCTCAGGGTGGCAGGGAGAGGAGCGAATGAGTACAGGAACAACAGAGCGGTCCATCTTCATCGATAACGTTTCTGTTCCGGGCAGCACTGAGCGTTACTTCCAAGGGTCGGCTACTGGCAACATCTTCAACTCCGGTCGTGTGTATGACTTGGTTCTCCTCAACTACGGACACAATGAAGGGACCAGCGTTCCGTCCATCACCATTAGTGCCGGGTTCACTGAAGCAATCTTCGCGTGTCGCCAGATTAACCCAATGGCTCCTATCGTCGTAACAGCACAGAACCCTCGCCGCGACTTCCCTGACCACTCTGCCCGCGCGGTAGCGTGTTGGGCCGATATAGCTGGTGTAAACGGACTTGGTGTTATTGACGTGTACTCTGCGTTCATCAAACTTGGCTCACCATCTGAACTGTACATCGACATGATTCACCCTAACGCTGAGGGTCATAAGGTATGGCTTGAAGTTGTGAAGAAGGCGCTTAGCGATACCCCAGCTTACCAGTTCGACAAGGTGGCCGAACCCTACAGTGGACCGCTTCGTATGAACCTAATCCCCAACCCTGCGTTTGTGACATGGGGTGTTGACGTTCCGGCGCTGTGGGAAGCCAACGCAGTGACTGTGACTCAGGACCTCACCCGTCGTGAGAGCTTTGCGTACTCAGTCAAGGTAACCTGTACCGACGTAAACAGTCCGCTGCTCTACGTTGACCTCTCGGACACCTTGACCGCCTCTCGTGGCCAGTGGGTAACATTCGCTGCCCGAGTGTGGAGACCTTCTGGCATCTCAACGAACGCGGGCCGCCTTCAGATTAGCGGCAGTGGGATGAATACCGTAACGTCTCGCAGCAAGGCTAACGAAGCGGAGAACGGTTGGATGTGGGCAGTGTGCCATGCGTTTGTGCCAAAGGGGGCCACATCCCTACATGCTCGCTTCTTGGGTGGTACTGTTGTGGGTGATTCCTTCAACGTTGACCGTGTGTGGTTCGGTATTGGCAAGGTACCTAGCGACATCGACTTCATGGGTCAACCAGTGGTAACTCTGGCAGATTATTACCAAGCCGAGAACGTTGGGGTACCTGTGGGCTATGACACTCAGGTGTCCGTAGATGGTAACCATATTGTGGCAACCCCTGTAACCTCAAAGGCGCGATTCTTCATCAACATTAACTACCTGACTCCGGGCCAGACCTACAGGGTCACTTGGTCCAAAGCATCCCCGGCTGATGGGTATGCTTACGCCCGGTCGTCTGGGGGTGGCCTTGGTGCGGTTCTGGATACTGTTCGTCTATCTGCTGGGACCACGAGTACGTTTGTGGCACCCTCGAAGACCTGCTCGTTCGTTATGGAGTCTGATGGTATAAACCCGCTCGATGTAACCATTGCGTCCATCGTCAAGGTATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
226a2401ffba5742e659f15e7c88fe1303a15c5d3bfe665259c84ffca00ae478
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7730
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of Klebsiella pneumoniae podophage Pharr Michalik,J., Lessor,L., Gill,J. and Liu,M. 2019-09-26 — GenBank