Protein

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Genbank accession
YP_009302745.1 [GenBank]
Protein name
putative tail tubular protein B
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MAQTPIRALEGTIQSLLQGVSQQVPRERQPGQLGAQLNMLSDPVSGIRRRPPGEIVWESTIDNPGLDSLFTEYVERGTDGRHLLINTSNGNWWLLSKNGKTILNSGNDPYFITTVGQTSLQTASIAGLTYILNTEMAPSTTVDNTGRIDPSTTGFFYVKSAAFQKRWNVTVTSAGVDYSGDYTAPAAGSTSGNAEEVSGAYVAQQLRASLVANGLPAGNVSVRGAYLFFYGLSNCVVSSDAGDTYAVVSNQSRVDQEQDLPAQLPAEADGAMCRVGTASSETAWYQFDYSTRTWSEVGAYGSITKITNMPRELAADDNIIARDWEGRLAGNDDNNSNPGFVENGYITGIAAFQGRLVLLSGSSVDMSASGLYQRFYRSTVTSLLDTDRISISSASAQDSVYRTAVQFNRDLVLFANSMQAVVPGSAVLTPTNASISITSTYDCDSRVTPVMAGQTVIYPNKRNDSYAGILELIPSPYTAAQYTTQDATVHLPRYIPGRVLQMQNSSVTNMAFSRMSGERNSLLVYEFMWGGSDGAKMQAAWHKWSFPYPILSVQALEDEVFLYMQGPSPSNKLLIVSMDPREGYQLGSEYREAYSDLQKQVQVQGGVFTVPAVLRPVGWADNYKEELILTYLPSNPMGPTEVGIKEIAGENTLRVVRGVPDGTYVIGRRYRSTFTLTTPILRDQNDKLVGSGHVRLLRLDVAVRNSGHFDVQVLDTPRDVNWGGELTGILMNSKELTLGKALRMDLATITVPCRTNADTTEVSLFTEGSMELNVLDISYILRYNRRRRRI
Physico‐chemical
properties
protein length:790 AA
molecular weight: 86433,94920 Da
isoelectric point:5,21915
aromaticity:0,08608
hydropathy:-0,24380

Domains

Domains [InterPro]
IPR058003
TTP
9–790
IPR058003
YP_009302745.1
1 790
Architecture
TTP
TTP 9-790
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009302745.1
1 790
Domain Start End Length (AA) Confidence
N-terminal 1 149 149 0,9931
Central domain 150 348 200 0,1227
C-terminal 349 790 441 0,0989
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-149
Central
150-348
C-terminal
349-790

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage KpV71
[NCBI] 		1796998 Uroviricota > Caudoviricetes > Autographivirales > Slopekvirinae > Drulisvirus
Host Klebsiella pneumoniae
[NCBI] 		573 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009302745.1 [NCBI]
Genbank nucleotide accession
NC_031246 [NCBI]
CDS location
range 26118 -> 28490
strand +
CDS
ATGGCGCAAACACCTATACGGGCATTAGAAGGTACTATTCAGAGCTTGCTGCAGGGTGTATCCCAGCAGGTTCCGAGAGAGCGCCAACCAGGACAACTGGGGGCGCAGCTGAATATGCTCAGTGACCCGGTTTCCGGTATCCGCCGTAGACCGCCTGGTGAGATTGTATGGGAAAGCACAATCGATAACCCTGGTCTTGATTCCCTGTTCACTGAATACGTAGAGCGTGGGACTGACGGTAGGCACCTGCTGATTAACACCAGCAACGGTAACTGGTGGTTGCTGTCTAAGAATGGCAAGACCATACTTAACTCTGGCAATGACCCATACTTTATTACAACCGTGGGTCAGACGTCTTTGCAGACGGCAAGTATTGCGGGTCTGACTTATATCCTGAATACGGAGATGGCCCCAAGCACAACCGTGGACAACACTGGGCGCATCGACCCCAGCACCACCGGGTTCTTCTACGTTAAATCCGCAGCATTCCAGAAACGTTGGAACGTCACCGTTACCTCGGCAGGGGTAGACTACTCAGGGGACTACACCGCCCCAGCTGCTGGTAGCACAAGCGGTAATGCTGAGGAGGTATCGGGTGCTTACGTTGCTCAGCAACTGCGTGCCTCTCTTGTAGCGAATGGGTTGCCAGCTGGGAACGTGAGCGTACGTGGCGCGTACCTGTTCTTCTATGGGTTAAGCAACTGCGTGGTATCCTCTGACGCGGGTGATACTTACGCTGTGGTGTCCAACCAGTCTCGTGTAGACCAGGAGCAGGACCTGCCTGCACAGCTCCCCGCAGAAGCCGATGGGGCAATGTGCCGAGTAGGTACGGCCTCGTCTGAGACGGCGTGGTACCAATTCGATTACAGTACCCGCACCTGGTCTGAGGTGGGGGCTTACGGCAGCATCACCAAGATTACGAACATGCCCAGAGAGCTTGCCGCGGATGACAACATTATTGCGCGGGACTGGGAGGGGCGCTTAGCGGGCAACGACGATAATAACAGTAATCCTGGTTTCGTCGAGAATGGTTATATCACAGGCATCGCAGCTTTCCAGGGCCGCCTGGTTCTGCTTAGTGGCAGCTCCGTGGATATGTCCGCCTCGGGCCTGTATCAGCGCTTCTACCGCTCTACTGTGACTTCCCTGCTGGATACAGACCGTATCAGCATTAGCTCTGCGTCTGCACAGGACTCTGTGTACCGCACCGCTGTGCAGTTTAACCGGGACCTGGTCCTGTTTGCTAACAGCATGCAGGCGGTTGTGCCGGGTTCGGCAGTACTTACACCAACTAACGCAAGCATCAGTATTACCAGCACCTATGATTGTGACAGCCGTGTTACCCCGGTAATGGCGGGTCAGACAGTAATCTACCCAAACAAGCGCAACGACAGCTACGCAGGTATACTGGAGTTAATCCCGTCGCCGTACACCGCTGCGCAGTACACTACGCAGGATGCCACGGTGCACCTACCTCGGTATATCCCAGGCAGGGTATTGCAGATGCAAAACTCCAGTGTCACCAATATGGCCTTCTCGCGCATGTCTGGAGAGCGTAATAGCCTGCTGGTCTACGAGTTCATGTGGGGCGGAAGTGACGGCGCTAAGATGCAGGCGGCGTGGCATAAATGGTCGTTCCCGTATCCAATCCTGAGCGTACAGGCGCTGGAGGACGAGGTGTTCTTGTACATGCAAGGGCCCAGTCCCAGCAACAAGCTCCTGATTGTGTCTATGGACCCGCGTGAAGGTTATCAGCTGGGCTCAGAATACCGCGAAGCCTACTCGGATTTGCAGAAGCAAGTTCAAGTACAGGGAGGGGTGTTCACTGTTCCGGCGGTATTGCGCCCGGTTGGGTGGGCGGACAACTACAAGGAAGAGCTTATCCTAACGTACTTACCCAGCAACCCTATGGGGCCTACTGAGGTTGGCATCAAGGAGATTGCCGGTGAGAACACCCTACGGGTTGTGCGCGGCGTACCTGATGGTACTTATGTAATCGGGAGACGTTACCGTAGTACGTTCACGCTAACTACGCCTATTCTACGGGACCAGAATGACAAGCTCGTGGGAAGTGGGCATGTGCGCCTGCTGCGCCTGGACGTGGCAGTACGTAACTCTGGGCACTTCGACGTACAGGTACTAGACACCCCGCGGGACGTAAATTGGGGTGGAGAACTGACTGGTATCCTGATGAACTCAAAGGAGCTGACGCTTGGGAAGGCTCTGCGTATGGACTTGGCTACGATTACCGTACCGTGTCGTACTAACGCAGACACAACCGAGGTGTCATTATTTACTGAGGGTTCTATGGAGCTGAACGTGCTGGATATCTCGTACATCCTGCGCTACAACCGACGCAGACGGAGAATTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
eb107fc30e0894ecfc1cb87f0ade896498f5ca1701ce8baf8acec1463546306d
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8789
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of bacteriophage vB_KpnP_KpV71 lytic for Klebsiella pneumoniae Komisarova,E.V., Krasilnikova,V.M., Kislichkina,A.A., Myakinina,V.P. and Volozhantsev,N.V. 2017-09-14 — GenBank