Protein

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Genbank accession
XCN28247.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MKDIEIIDIDYSAKDPAFKKEDEVEVTKISGPWIIPEEGPVYADSVRVLKGGLDLIPGTDFEPVEEVTDLSLKTGKKVVLYVKLKAHILQGGGKLDMIYQRVGLPIISTKKLIETLEEMVIKGKPVDWETGVQNKPKTYYPSWHSHDIKNSNELVGFGGLVELFSRLTWEQGNEGTKMQTLLQALQTEMYNKLDYVHKLKWGAIMDHSRNYNNPHGVVPGNVNAGNLNNYATATPQEDSEGKREDLRSTPAGLSRMISEQSPETEDYLVQNELPFGYYGSGIYLPPPITGSFEGLGSDVENSAFVKEGNGWTVGLIRGYDGRVKNLYYIYNEDILDRTGRSKWLHTYVQYKHNTISAEQVPDPTPEDPNHTRDKYTANMIMSGSNQSVICIGDVKEGNQQQVTGQDRWWIGITNSTMDPASHTLKPINITDVVNETPLTNGRQAGYGAIFHVGDWVYYIHNYQDLKNDDPAYTGAAGINNWESRMWRFRYSDLSNTAVTSITLQPVNVTYDNLDRQRRTGRSMFMIRHHTNAAGQLVEGAIKYSYPIRDCGYHRRRQFIVVPNPNNPRYARVKVLCVSYSNVKNRENDGVRGLWQDLVIDYDWDVETNTWTLHSSWRKPTLDVDTNTWIDINRDWNQGFGHAEHTNRFVYTAGSYIPGVGFASLESLQTGVPPFHVGVSQINRDGDPRKDYDWMLQPINWWDSVNRHNAWSFPFVMKSPFGVAGFPRFYSDIYQMTDGLRTTPIEIFFAENEGQGQSCYYRITEGGAGNDYTARTGLQSRYIDRPLYGRATNSNFGTVNGLTYNIGMAHRPRRKNSTSRGTGLFSYVRRNVQANPGAPNDFTWRINDQGQQIQLPIESNGDIIINIDMDYRLDGPTKVLFVRPNKAKQVRVPRSLWQDMVKNAMGSHYARVLDMGVSFYISAQPGSGGDQPFSMWQVTYHLSDSPEDTRSIIGMFTWSQNGSVDGIPVVKFDNMQYPFTASGNAARPLKPGTDANISAQGPHHAINPNGSWSFIGYGVGLSVKYQHMEILDFESEGPQNLEQCWLPGLQINVPGNMTGLRIFFKRRNNVISEATAEWSANSAFNWEYGNQVQANSQWGWLSGVASEVSGGAMDLMQPWKGPLGQWPVVQDKYILLGATYVEGNWSVFINSEVTVTFNGFSMMAKMQNWDLRELSDEYRNQVFYIYCCANGSGAYYEVTKVLRNHDANKILVATVRTNNLGIYEIERAQTFTISGFPIIRTRNMGVPASSGALTEQGNYQFLKRSDLFAG
Physico‐chemical
properties
protein length:1269 AA
molecular weight: 143270,78100 Da
isoelectric point:6,02768
aromaticity:0,11269
hydropathy:-0,52364

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XCN28247.1
1 1269
Domain Start End Length (AA) Confidence
N-terminal 1 266 266 0,9932
Central domain 267 480 215 0,8184
C-terminal 481 1269 788 0,4258
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-266
Central
267-480
C-terminal
481-1269

Taxonomy

  Name Taxonomy ID Lineage
Phage Pantoea phage Survivor
[NCBI] 		3232176 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pantoea sp.
[NCBI] 		69393 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XCN28247.1 [NCBI]
Genbank nucleotide accession
PP885733 [NCBI]
CDS location
range 128090 -> 131899
strand +
CDS
ATGAAAGATATTGAAATTATCGACATCGACTATTCTGCCAAAGATCCTGCTTTTAAGAAAGAGGATGAGGTCGAAGTCACTAAGATCTCCGGACCTTGGATCATCCCTGAAGAAGGACCTGTGTACGCAGATTCCGTAAGGGTGCTCAAAGGCGGGTTAGATCTTATCCCTGGTACTGATTTTGAGCCCGTTGAGGAAGTTACTGACCTCTCACTCAAAACCGGTAAAAAGGTTGTTCTTTACGTCAAGCTGAAAGCACACATCCTTCAGGGTGGTGGTAAGCTTGATATGATTTACCAGCGTGTTGGGTTACCAATCATTTCTACCAAAAAGCTCATTGAGACTCTGGAAGAGATGGTTATCAAAGGTAAGCCTGTTGACTGGGAAACTGGCGTACAGAACAAACCCAAAACGTATTACCCGTCCTGGCATAGTCACGACATTAAGAACTCCAATGAACTCGTTGGGTTTGGTGGTCTGGTTGAACTCTTCTCTCGTCTGACCTGGGAACAGGGTAACGAAGGGACCAAGATGCAGACGCTCCTGCAAGCTCTCCAGACAGAGATGTATAACAAACTGGACTATGTTCACAAGTTGAAGTGGGGTGCCATCATGGACCACTCACGCAACTATAACAACCCTCACGGTGTTGTTCCGGGTAACGTCAATGCGGGTAACCTGAATAACTACGCTACGGCGACACCTCAGGAAGACTCCGAAGGCAAACGTGAAGACTTACGCTCTACTCCGGCCGGTCTGTCCCGTATGATATCTGAACAGTCTCCTGAAACTGAAGACTACCTGGTTCAGAACGAACTCCCGTTTGGTTACTACGGTTCTGGTATTTATCTACCACCACCAATCACAGGTTCGTTTGAAGGTCTGGGTTCTGACGTTGAAAACTCTGCCTTTGTAAAAGAAGGTAACGGTTGGACAGTTGGTTTGATCCGTGGTTACGATGGTCGTGTTAAGAACCTTTATTATATCTATAATGAAGATATCCTTGACCGTACTGGACGTTCTAAGTGGCTTCACACTTATGTTCAGTATAAACACAACACCATCTCCGCTGAACAGGTTCCTGACCCAACCCCAGAAGACCCTAACCATACCCGTGATAAATACACCGCCAACATGATCATGTCTGGTTCTAACCAAAGTGTGATCTGTATCGGTGATGTGAAGGAAGGTAACCAACAGCAGGTTACCGGACAAGACCGTTGGTGGATTGGGATCACTAACTCCACAATGGACCCGGCATCCCATACCCTGAAACCAATCAACATTACCGATGTAGTTAATGAAACTCCGTTAACTAATGGGCGTCAGGCGGGTTATGGTGCTATCTTCCATGTAGGTGATTGGGTGTATTACATCCATAACTATCAGGACCTGAAGAACGACGATCCAGCTTATACCGGTGCTGCTGGTATTAACAACTGGGAAAGTCGTATGTGGCGTTTCCGTTATTCCGATCTGAGTAATACTGCTGTAACGTCTATCACACTTCAGCCTGTAAACGTAACCTACGATAACCTTGATCGTCAACGTCGTACCGGCCGTAGCATGTTTATGATTCGTCACCACACTAATGCTGCTGGTCAGCTGGTTGAAGGCGCAATCAAATACAGTTACCCTATCCGTGACTGTGGTTACCACCGCCGTCGCCAGTTCATCGTTGTGCCTAACCCTAACAACCCTCGTTATGCTCGCGTTAAAGTTCTCTGTGTTAGTTACTCTAACGTTAAGAACCGTGAGAACGATGGTGTTCGCGGTTTGTGGCAAGATCTGGTAATTGACTACGACTGGGATGTTGAAACCAATACGTGGACGTTACACTCAAGCTGGCGCAAACCAACCCTTGATGTTGACACCAATACTTGGATCGATATCAACCGTGACTGGAACCAAGGCTTTGGTCACGCAGAACACACCAACCGCTTTGTGTACACAGCGGGCAGTTACATCCCTGGTGTCGGGTTTGCATCTCTCGAATCTCTCCAGACAGGTGTACCTCCATTCCACGTTGGTGTTTCTCAAATCAACCGTGATGGCGACCCTCGCAAAGATTACGACTGGATGCTTCAGCCGATTAACTGGTGGGACAGTGTAAACCGCCATAATGCCTGGTCATTCCCGTTCGTTATGAAATCTCCTTTTGGGGTTGCTGGATTCCCTCGCTTCTATTCTGACATCTACCAGATGACGGATGGACTAAGAACCACACCTATCGAGATCTTCTTTGCAGAGAACGAAGGTCAGGGACAGTCTTGCTACTACCGTATCACTGAAGGCGGAGCAGGTAATGACTATACTGCTCGCACTGGTTTGCAGTCTCGTTATATCGATCGCCCTTTATACGGTCGTGCGACTAACTCCAACTTCGGGACAGTAAACGGTCTGACTTACAACATCGGGATGGCGCATCGCCCTCGTCGTAAGAACTCCACTTCTCGCGGTACAGGTTTGTTCAGTTATGTTCGTCGTAACGTTCAGGCTAACCCAGGTGCACCTAACGACTTTACCTGGCGTATCAATGACCAAGGTCAGCAAATCCAGCTCCCTATTGAAAGTAATGGTGACATCATCATTAACATCGATATGGATTATCGTCTGGATGGTCCGACTAAGGTTCTGTTCGTTCGACCTAACAAAGCCAAGCAAGTTCGCGTTCCTCGCTCTTTGTGGCAGGATATGGTTAAGAACGCGATGGGTAGTCATTACGCTCGAGTGCTCGATATGGGGGTTAGCTTCTATATCTCTGCGCAGCCAGGTAGTGGTGGGGATCAACCATTCTCTATGTGGCAGGTAACCTATCACCTGAGTGACAGTCCCGAAGATACCCGTTCCATCATCGGTATGTTTACCTGGTCTCAGAACGGTTCTGTCGATGGCATCCCTGTTGTTAAGTTCGACAACATGCAATACCCATTCACTGCGTCAGGTAATGCCGCGAGACCTTTGAAACCAGGTACTGATGCCAACATTAGTGCCCAAGGACCACACCACGCCATCAACCCTAATGGTTCCTGGAGTTTCATCGGGTATGGAGTTGGGTTGTCCGTTAAGTACCAGCATATGGAAATACTGGACTTTGAATCAGAAGGTCCACAGAACCTTGAACAGTGCTGGTTACCTGGCCTACAGATCAACGTTCCAGGTAATATGACGGGTCTTCGTATCTTCTTCAAACGCCGCAACAACGTTATCTCTGAGGCAACAGCCGAGTGGTCTGCGAACAGCGCATTCAACTGGGAATACGGAAACCAAGTTCAGGCTAACTCCCAATGGGGTTGGTTATCAGGTGTTGCTTCTGAAGTATCTGGCGGCGCAATGGACCTGATGCAGCCATGGAAAGGACCTCTGGGACAATGGCCGGTTGTTCAGGATAAGTACATCCTGCTCGGTGCGACATACGTTGAAGGTAACTGGTCGGTGTTTATCAACTCCGAGGTAACTGTAACCTTTAATGGCTTCAGTATGATGGCCAAGATGCAGAACTGGGATCTTCGTGAGTTATCTGACGAGTACAGGAATCAGGTATTTTATATCTATTGCTGTGCTAACGGTTCGGGTGCTTATTATGAAGTAACCAAAGTTCTTCGCAACCATGACGCGAACAAAATCCTGGTGGCAACTGTGCGTACGAACAACCTCGGGATTTACGAGATCGAGCGAGCTCAGACATTTACTATCTCTGGCTTCCCAATCATCCGTACTCGCAACATGGGTGTCCCGGCATCTTCTGGTGCTCTTACTGAACAAGGTAACTATCAGTTCTTAAAACGTAGCGACCTCTTTGCTGGTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
95302223488c02b1daa52df23ae2f516d8d80b29bc04f3460ad9897b8cfb6774
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2685
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50