Protein

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Genbank accession
QIW88484.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MKTIYAASKALVAPTITTSTSSGSVVSGTYYFFLIRRNRAGYTSPSPAATVVLSGTGSITIAASNFTTLSYEDIKETLISVSTTNSYTSSRVIYRFNHFAADYITPITPSNIVITTNATLNSPTSYNNPADISALTGLLTGFRVLLNGNGFVYEFISGSVVPVDNITVLNHSSGRWIKTREASLYETTSLAEIDVISADQDTLLVAPLENINSIPVPIKYWIVNDTGGTLTGLRLNLSEYTSDPAIRLVFGVKIIGYINLTSFVLDTTGIDNLGVIQEYPTLDIAFNKGIPSGSAVVIEVTPSSQLLDGISAQSFISIYPKLVNYALLQDLLFWDAPVDNIAALKSLNSVQYKSGQVRLVESVNRPYKYDAASTLADNGDTVLIPNTNPTTGRWVVFDPVLPDGSVGLSKLSSEVITALGDQIKTNTVTINSPTNYTIDLDADYDYLILKTPIADNSNTITNINFTATLTNNQTKALIVELVQQTGAIAFDNTILFPSGTTPVLSGNGKSDIILFSARKDSLGVVKKRGKIVTTDAG
Physico‐chemical
properties
protein length:537 AA
molecular weight: 57595,41650 Da
isoelectric point:4,90881
aromaticity:0,08380
hydropathy:0,13892

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudanabaena phage PA-SR01
[NCBI] 		2723892 No lineage information
Host Pseudanabaena sp.
[NCBI] 		1153 cellular organisms > Bacteria > Bacillati > Cyanobacteriota/Melainabacteria group > Cyanobacteriota > Cyanophyceae

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QIW88484.1 [NCBI]
Genbank nucleotide accession
MT234670.1 [NCBI]
CDS location
range 47588 -> 49201
strand +
CDS
ATGAAAACCATTTACGCTGCCAGTAAAGCTTTAGTTGCACCAACAATCACCACATCTACGTCATCTGGTTCTGTGGTATCGGGTACATATTACTTCTTTTTAATCCGTAGAAACCGTGCTGGCTATACTTCGCCATCTCCTGCCGCTACAGTAGTTTTATCTGGTACAGGCAGCATTACAATCGCAGCAAGTAACTTCACGACTTTATCATACGAAGATATAAAAGAAACTCTAATCAGCGTATCAACTACTAACTCCTATACTTCTTCGCGTGTCATTTATCGCTTCAACCACTTTGCCGCAGACTACATAACCCCAATCACTCCCAGTAACATAGTAATCACTACTAACGCCACTTTAAACAGTCCTACCTCATATAACAACCCCGCAGACATTAGCGCTCTCACAGGCTTATTAACAGGCTTCAGGGTGCTTCTCAATGGAAATGGTTTTGTATACGAATTTATTAGCGGTTCAGTAGTTCCTGTCGATAATATTACTGTATTGAACCATAGTAGCGGCAGGTGGATAAAAACTCGCGAAGCAAGCCTCTACGAAACTACTTCTTTAGCTGAAATTGACGTAATCAGCGCTGACCAAGACACATTACTCGTTGCCCCACTCGAAAACATCAACTCAATACCAGTCCCTATAAAATACTGGATTGTGAACGATACAGGTGGCACTTTGACAGGCTTGCGCCTCAACCTAAGTGAATATACCTCTGACCCAGCTATCCGACTAGTCTTTGGAGTTAAAATCATTGGCTACATCAACCTCACTTCGTTTGTACTAGATACGACTGGCATCGACAACCTCGGAGTCATTCAAGAGTACCCAACACTCGATATTGCGTTTAACAAAGGCATTCCTAGCGGTTCGGCAGTGGTCATTGAGGTCACACCATCTTCGCAGCTTCTAGATGGCATTAGCGCCCAAAGTTTCATCAGCATCTACCCCAAACTGGTCAACTACGCTCTCCTGCAAGACCTACTGTTCTGGGATGCACCAGTAGACAACATTGCGGCACTAAAGAGCCTCAACTCAGTGCAATACAAATCTGGGCAAGTACGTTTGGTTGAATCGGTCAACAGACCTTACAAATATGATGCTGCTTCGACACTTGCTGACAACGGCGATACAGTTTTGATTCCTAATACAAATCCGACAACTGGTAGGTGGGTAGTTTTTGACCCTGTACTGCCCGATGGAAGTGTTGGACTATCTAAACTATCTTCAGAGGTGATAACGGCTCTTGGCGACCAAATAAAGACCAACACCGTTACAATTAACTCACCTACAAACTACACAATTGACCTCGATGCAGATTATGACTACCTGATTCTGAAAACACCAATTGCAGACAACAGCAATACAATTACCAACATCAACTTTACCGCTACACTTACAAATAATCAAACTAAGGCGCTTATAGTCGAGTTGGTGCAGCAGACAGGAGCGATAGCTTTTGACAACACTATTTTATTTCCAAGTGGGACAACTCCTGTGCTTTCTGGTAACGGAAAGTCAGATATAATCCTTTTTTCTGCCAGAAAAGATTCTTTAGGGGTAGTAAAGAAGCGTGGTAAAATTGTTACAACAGATGCAGGATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
6bc6cbbc0d3d9e189180901719a9b8103015ae8ea8ac6c9ce2e44d5d8a812f5f
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,6101
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation and characterization of first freshwater cyanophage infecting Pseudanabaena Zhang,D. 2020-08-17 — GenBank