Protein

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Genbank accession
AZF89409.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,88
Protein sequence
MPSTSKTPTLGLNKWELTDKPKMNDFNKDNENIENFATEHKQKMTEVEKKSKSNEDRLDALRVGTINRLEWYNSESYTGPGNITPITDTPTKRRGFKWSGMSTGPQTLEIKTLPIEPNSDYILAFLEDIEGSFTSYEIKLAYTNGGQQYKSIVKQGSTPQSNGYKLKTHKFSIPSGATDTKIQFVVQGATSSTSLKVLNILLARGNVVPDYNLAPEDILKRLDLLFEKDDNLQAQIHQKAAQTDVLLKVNVPLDRDCNTFKQVNAFFSFDTGSGDFKNTPDGTLAQGSSRVFTVRNYGYSEGRFQQEFINIYPANNITRYIRNYIYESNSWSKWYKVYDEANKPTPKELGAYPTPKNAITDFNLALTEGQYLISGELPNAPITGVRYGILVIYVSDQDKHNNSNNWIWQEYYDTSGNKYWRYKVNDKDWFPWRKDYNSGAKPTPADIGAWDKTAKRLEGVDLNTITEGGIYSTVRNSVDRNAPILADGRLIVLSWNTGHWASQMFFADGGRVFTRTATNLEGTGWTNWAEIYSKQNKPTPADIGALPTTGGELSGHLIMRPGQKFIGAHNYGFSCRTKEGSDDYVMYIDADNKVHIGYAGRPVKIDSLDIVNKNNKKIYHEDNKPTLDDLGASGKGLCLDNRQPFEVGGEANKYYPVVIKAGELKSTGVYGLIKLSISRGYASKAPDSWNTSTHKGGLTLTILTSGDCYWGGNDPNLEVLRFDQKYSTMVAGMRLSTRGIVVWLRGGGAQYYLTSDYGAASTATVELEGFTDSAEQVFGIRTDDSQVNSEIVSKYKLRTSGLYDEGERVYSPHNKPSLSDLGAASSNHNHDSAYLGKTATAANSNKLANMGIYDYESGTQGIPSVGNDGVMEIGQILDFHLKGSNKDYDMRITTRDGSLEVDKALSAENLWARKYLRINDWYGGAEDGRLWFKQENKKLYTENVTDFVVNDRSIAKGDYWDNDNGNVRVCHLGGGLRLVRQIVKTGYANSGGGVSYTIHFPKAWNWVLPISLVSHNYNDASNNTSGYCTIDHWTNSYLNGGCYQMVAGKPTQIILTYLATE
Physico‐chemical
properties
protein length:1061 AA
molecular weight: 118395,52330 Da
isoelectric point:6,56260
aromaticity:0,10839
hydropathy:-0,60443

Domains

Domains [InterPro]
DC_1938
ATT
5–408
DC_1938 DC_1209
Coil
Unmapped
30–50
Coil cd19958 cd19958
AZF89409.1
1 1061
Architecture
ATT
STR
STR
ATT 5-408 | STR 409-436 | STR 453-592 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AZF89409.1
1 1061
Domain Start End Length (AA) Confidence
N-terminal 1 73 73 0,9682
Central domain 74 272 200 0,3877
C-terminal 273 1061 788 0,4146
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-73
Central
74-272
C-terminal
273-1061

Taxonomy

  Name Taxonomy ID Lineage
Phage Clostridium phage CPD4
[NCBI] 		2483607 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Clostridium perfringens
[NCBI] 		1502 cellular organisms > Bacteria > Bacillati > Bacillota > Clostridia > Eubacteriales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AZF89409.1 [NCBI]
Genbank nucleotide accession
MK017819 [NCBI]
CDS location
range 12160 -> 15345
strand -
CDS
ATGCCAAGTACTAGTAAAACTCCTACTCTAGGTTTAAATAAGTGGGAGTTAACAGATAAGCCAAAAATGAATGATTTTAACAAGGACAATGAGAACATTGAGAACTTTGCTACCGAACATAAACAGAAAATGACTGAGGTAGAAAAGAAGTCTAAGTCTAATGAGGATAGGCTAGATGCTTTAAGGGTTGGTACTATTAATAGGCTTGAGTGGTACAACTCTGAGTCTTATACTGGTCCTGGTAATATCACACCCATTACAGATACTCCAACCAAGAGACGAGGTTTTAAATGGTCTGGTATGTCAACAGGTCCACAAACTCTTGAGATTAAAACTCTGCCTATAGAACCAAATAGTGATTATATACTAGCCTTTCTAGAAGATATTGAAGGTAGTTTTACTAGCTATGAAATTAAACTGGCTTACACTAATGGGGGTCAACAATATAAGAGTATTGTAAAACAAGGTAGTACACCACAGAGTAATGGGTACAAGTTAAAAACTCATAAGTTTAGTATTCCTTCTGGAGCTACTGATACCAAAATACAATTTGTGGTACAAGGTGCAACCTCAAGCACATCATTAAAGGTACTAAACATCTTATTAGCTAGGGGTAATGTAGTACCCGACTATAACCTAGCCCCTGAGGATATACTAAAAAGACTAGATCTTTTATTTGAGAAAGATGACAATTTACAGGCTCAGATACATCAGAAAGCTGCTCAGACAGATGTGCTTCTAAAGGTTAATGTCCCTTTAGATAGAGACTGTAATACTTTTAAACAAGTAAATGCCTTTTTCTCCTTTGACACAGGCTCTGGTGATTTTAAGAATACCCCCGATGGAACACTAGCCCAAGGAAGTTCTAGAGTCTTTACAGTTAGAAACTATGGTTATAGTGAAGGTAGATTCCAACAAGAGTTTATTAATATATATCCAGCCAACAATATAACTCGATATATCAGAAACTATATATATGAGAGTAATTCCTGGAGTAAATGGTATAAGGTTTATGATGAAGCTAATAAGCCTACACCAAAAGAATTAGGAGCATATCCTACACCCAAAAATGCCATAACCGATTTTAATCTGGCTTTGACAGAGGGACAGTATCTAATATCAGGTGAGTTACCTAATGCCCCTATAACTGGTGTAAGGTATGGAATACTAGTTATATACGTAAGTGACCAGGACAAACATAATAATAGTAATAACTGGATATGGCAAGAATATTATGACACTAGTGGTAATAAATATTGGAGGTATAAGGTAAATGATAAGGATTGGTTCCCTTGGAGAAAAGATTATAACTCCGGAGCTAAGCCAACACCCGCAGATATTGGGGCCTGGGATAAAACAGCCAAAAGACTAGAGGGTGTAGATCTAAACACCATTACAGAGGGAGGTATTTATTCTACAGTTAGAAATTCTGTCGATAGAAATGCCCCAATCCTAGCAGATGGGAGATTGATTGTTTTATCCTGGAATACAGGACACTGGGCTTCTCAAATGTTCTTTGCAGATGGTGGAAGAGTTTTTACTAGAACAGCTACAAACCTGGAGGGTACCGGATGGACGAATTGGGCTGAAATATATAGTAAACAAAATAAGCCTACTCCAGCAGATATTGGTGCCTTACCTACTACGGGTGGAGAATTATCAGGCCATCTAATCATGAGACCTGGTCAGAAATTTATTGGAGCCCATAATTATGGATTTAGTTGTAGGACTAAAGAGGGTAGCGATGATTATGTGATGTATATAGATGCCGATAATAAAGTTCATATAGGGTATGCAGGGAGACCTGTAAAAATAGACTCTTTAGATATTGTTAATAAGAACAATAAGAAGATCTATCATGAAGATAATAAGCCCACTTTAGATGATCTTGGTGCTAGTGGCAAGGGTTTATGTCTTGATAATCGCCAACCTTTTGAAGTAGGGGGAGAAGCTAATAAATATTACCCGGTTGTTATAAAAGCTGGGGAGTTAAAGTCTACAGGCGTGTATGGTTTAATCAAACTATCCATATCTAGAGGATATGCCTCTAAAGCCCCGGATTCATGGAATACCAGCACACATAAGGGAGGATTAACTCTTACGATTTTAACCTCTGGAGATTGCTATTGGGGAGGTAATGACCCTAATCTAGAGGTTCTAAGATTTGACCAAAAATATTCAACTATGGTAGCTGGCATGAGATTATCAACTCGAGGAATTGTGGTATGGCTTAGAGGGGGTGGAGCTCAATACTACCTAACTAGTGATTATGGTGCTGCATCTACTGCTACCGTAGAACTTGAGGGCTTTACAGACTCAGCTGAGCAAGTCTTTGGTATTAGAACTGATGATAGTCAGGTAAATTCTGAGATTGTGTCAAAATATAAACTTAGAACTTCAGGTTTATATGATGAGGGCGAAAGAGTATACTCACCCCATAATAAACCTAGCCTATCCGACCTAGGAGCAGCCTCCTCAAACCATAACCATGATAGTGCCTATTTAGGTAAAACAGCTACAGCTGCTAACAGTAACAAGTTAGCTAATATGGGAATTTATGATTATGAGTCCGGAACCCAGGGTATACCTAGTGTAGGCAATGATGGGGTCATGGAGATAGGCCAAATTCTGGACTTCCACTTAAAAGGTAGTAATAAAGATTATGATATGAGAATAACTACTAGAGATGGATCTCTAGAAGTTGATAAGGCCCTATCAGCTGAAAACCTATGGGCTAGAAAATACCTAAGAATAAATGACTGGTATGGTGGAGCTGAAGATGGAAGATTGTGGTTCAAACAAGAGAACAAAAAGCTATATACTGAGAATGTTACTGACTTCGTTGTAAATGATAGATCTATTGCTAAAGGAGACTATTGGGATAATGACAATGGTAACGTTAGAGTATGTCATCTTGGGGGAGGACTAAGATTAGTTCGTCAAATAGTTAAGACAGGTTATGCTAACTCAGGTGGAGGTGTAAGTTATACTATACATTTTCCTAAGGCTTGGAATTGGGTATTACCTATATCTCTGGTATCTCATAACTATAATGACGCTTCTAATAATACCTCTGGTTATTGTACTATTGACCATTGGACTAACTCATATTTAAATGGTGGATGTTATCAAATGGTAGCTGGTAAGCCAACTCAAATAATACTAACCTATTTAGCTACTGAGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
4fdf3de5c23d1d934f57025d5a18dbf2f56c75189fb3032f65e0ad46eb0c2fb1
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2811
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of Clostridium perfringens phage CPD4 Shin,D. and Ryu,S. 2022-11-17 — GenBank