Protein

View in Explore
Genbank accession
WCZ57928.1 [GenBank]
Protein name
long tail fiber
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
Protein sequence
MAIKTKIIVQQILNIDDTTTTASKYPKYTVVLGNSISSITAGELTAAVEAAAGSAAAAKGSEIAAKDSENKAKDSEIQAGIHADASEASATQSAASAAESEKQANLSQSSAENSAASAVESKNFKDASKLAAQNAEQSKILSEQAQRAAEAAQSGAQASENRASAFATQAAASSASAGDFAAAAKQSELNAKTSEINAATSEVGAETQAETATTEANRAKAEADRAAQIVDIKLDKEDISGFIKVYKTKAEADADVGSRVLGEKILVWNQTDSKYGWYKVAGTAEAPVLELVEIEQKLVSVNNVRADDAGNVQITLPGGNPSLWLGEVTWFPYDKDSGVGYPGVLPADGREVLRVDYPDTWEAIEAGLIPSVTEEQWQAGATLYFSTGDGSTTFRLPDMMQGQAFRAAAKGEENAGNIKEQIPYITSVNGVLPEDATGAIILGLSSVEGTLSIAKGGTGATTKEAARTALEVPAASDVYTKAETYEKSELYTQTEVDDKLVY
Physico‐chemical
properties
protein length:502 AA
molecular weight: 52306,90790 Da
isoelectric point:4,53549
aromaticity:0,05578
hydropathy:-0,31355

Domains

Domains [InterPro]
DC_0608
ATT
1–499
DC_0608
Coil
Unmapped
209–229
Coil
WCZ57928.1
1 502
Architecture
ATT
ATT 1-499 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage Kenya-K38
[NCBI] 		3027626 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Salmonella enterica
[NCBI] 		28901 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WCZ57928.1 [NCBI]
Genbank nucleotide accession
OQ291035.1 [NCBI]
CDS location
range 81913 -> 83421
strand -
CDS
ATGGCAATTAAAACTAAAATTATTGTACAGCAGATTCTGAACATAGATGACACTACAACTACTGCTAGTAAGTATCCTAAATATACAGTAGTTTTAGGTAATTCTATTAGTTCTATTACTGCTGGTGAATTAACTGCTGCTGTAGAGGCCGCTGCAGGATCTGCTGCTGCTGCTAAAGGTTCTGAAATAGCAGCTAAAGACTCTGAAAATAAAGCTAAAGATTCAGAAATCCAGGCAGGTATTCATGCTGATGCTTCTGAGGCTTCAGCAACCCAGTCTGCCGCTTCTGCTGCTGAATCTGAAAAGCAAGCTAACTTATCCCAAAGTAGCGCGGAAAACTCTGCTGCTTCTGCAGTAGAATCTAAGAATTTTAAAGATGCTTCGAAACTTGCTGCTCAAAATGCAGAGCAGAGCAAGATTTTATCAGAGCAAGCTCAAAGAGCGGCAGAAGCTGCCCAGTCTGGTGCTCAAGCTTCTGAAAATAGAGCGTCAGCATTTGCTACACAAGCTGCTGCATCTTCAGCTTCCGCAGGAGATTTTGCTGCAGCCGCTAAACAATCTGAATTAAATGCTAAAACTTCTGAAATCAATGCTGCAACATCAGAAGTGGGAGCGGAAACCCAAGCTGAAACTGCTACTACTGAGGCAAATCGTGCTAAGGCTGAAGCCGATCGCGCAGCTCAGATTGTAGATATTAAGTTGGATAAAGAAGATATATCTGGCTTTATCAAAGTCTACAAGACTAAAGCCGAAGCCGATGCTGATGTTGGAAGTCGTGTACTAGGGGAGAAGATCCTAGTATGGAATCAAACTGATTCAAAATATGGGTGGTATAAGGTCGCTGGTACTGCTGAGGCTCCTGTTCTAGAATTAGTAGAAATAGAGCAAAAGCTAGTTTCTGTTAATAACGTTCGTGCAGATGACGCGGGTAACGTACAGATTACTCTTCCTGGTGGTAACCCCTCTTTATGGCTAGGTGAAGTTACTTGGTTCCCTTATGATAAAGATTCAGGTGTTGGCTACCCCGGTGTTCTTCCTGCCGATGGTCGTGAAGTTCTTCGTGTAGACTATCCAGATACTTGGGAAGCTATTGAGGCTGGCTTAATCCCCTCTGTTACGGAAGAACAATGGCAGGCTGGTGCAACACTCTACTTCTCCACTGGTGATGGTTCCACAACCTTCCGTTTACCAGATATGATGCAGGGCCAAGCATTCCGTGCTGCTGCAAAAGGTGAAGAGAATGCCGGTAATATTAAGGAGCAGATTCCATATATTACCTCAGTTAACGGAGTTTTGCCGGAGGACGCTACTGGTGCTATAATTCTTGGACTCTCTTCGGTTGAAGGTACCCTTTCTATTGCCAAGGGCGGTACAGGGGCGACTACTAAAGAGGCTGCTAGAACAGCCCTAGAGGTACCTGCTGCTTCAGATGTATATACTAAAGCAGAGACTTATGAAAAATCTGAACTATATACTCAAACTGAGGTAGATGATAAACTAGTATACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
3563b1c5a26150a2f1de1a2bee55eed609e7f879bfeb371a66b0971a63bc164d
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7317
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Whole genome sequence of Salmonella phage Kenya-K38 Gunathilake,D., Makumi,A., Loignon,S., Trembley,D., Labrie,S., Svitek,N. and Moineau,S. 2024-01-11 — GenBank